SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000250
Gene Symbol: MPO
Description: Homo sapiens myeloperoxidase (MPO), nuclear gene encoding mitochondrial protein, mRNA.
Gene Location: chr17(-):56347216-56358296
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.58270058G>T COSN14563456 8067938 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1287 gagggataATCCAGCtgca
 0 UGCUGGAU m7b Created no TS -0.167000 -0.500000
hsa-miR-5580-5p gagggataAGCCAGCtgca
 2
 UGCUGGCU m7b Disrupted -0.365000 -0.153000 -1.420000

Mutation Mutation ID Sample Name Cancer Type
chr17:g.58270477C>T COSN8244496 PCSI_0164_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4643 cttttCATGTGTgtgtgtt
 1
 GACACAUG m7b Created -0.055000 -0.231000 -0.020000

Mutation Mutation ID Sample Name Cancer Type
chr17:g.58270508A>T COSN6107979 RK119_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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