SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_002430
Gene Symbol: MN1
Description: Homo sapiens meningioma (disrupted in balanced translocation) 1 (MN1), mRNA.
Gene Location: chr22(-):28144264-28197486
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr22:g.27748798G>A COSN8997234 8051716 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr22:g.27749034G>A COSN9163542 AOCS-055-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-212-5p gtgtgaGCCAAGGcagttc
 0 ACCUUGGC m7b Created no TS -0.122000 -0.870000
hsa-miR-24-3p gtgTGAGCCAaggcagttc
 0 UGGCUCAG m7a (m6b->m7a) -0.081000 -0.133000 No effect
hsa-miR-4312 gtgtgagcCAAGGCagttc
 0 GGCCUUGU m6b Created no TS -0.067000 -0.010000
hsa-miR-4638-5p gtgtgAGCCGAGgcagttc
 2
 ACUCGGCU m7b Disrupted -0.097000 no TS 1.110000

Mutation Mutation ID Sample Name Cancer Type
chr22:g.27749539G>A COSN8997235 8051719 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1913 ggttggcaGGGGCAGgcaa
 2
 UCUGCCCC m7b Disrupted -0.121000 -0.075000 0.130000
hsa-miR-2682-3p ggttggcAGAGGCaggcaa
 0 CGCCUCUU m6b Created no TS 0.013000 -0.050000
hsa-miR-324-3p ggttggcaGGGGCAGgcaa
 2
 ACUGCCCC m7b Disrupted -0.130000 -0.075000 No effect
hsa-miR-331-3p ggttggCAGGGGCaggcaa
 0 GCCCCUGG m7a Disrupted NA NA No effect
hsa-miR-4722-3p ggtTGGCAGGggcaggcaa
 2
 ACCUGCCA m7b (m7b->m6c) -0.109000 -0.102000 5.580000
hsa-miR-4727-5p ggtTGGCAGAggcaggcaa
 0 AUCUGCCA m7b (m6c->m7b) no TS -0.021000 -0.720000
hsa-miR-4749-3p ggttggcAGGGGCaggcaa
 0 CGCCCCUC m6b Disrupted -0.049000 no TS 0.070000

Mutation Mutation ID Sample Name Cancer Type
chr22:g.27749715A>G 0_596 Prostate cancer
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1237 gacagAGAAGGAgaataga
 10
 UCCUUCUG m7a Created 0.078 0.091 No effect
hsa-miR-1248 gacagAGAAGGagaataga
 10
 ACCUUCUU m6b Created 0.124 0.142 No effect
hsa-miR-130b-5p gacagaGAAAGAGaataga
 7
 ACUCUUUC m7b Disrupted 0.007 no TS No effect
hsa-miR-4279 gacagagaAGGAGAataga
 7
 CUCUCCUC m6b Created no TS 0.012 No effect
hsa-miR-4753-3p gacagagAAAGAGAAtaga
 7
 UUCUCUUU m8a Disrupted 0.096 no TS 0.03
hsa-miR-4768-5p gacagagaaAGAGAATaga
 7
 AUUCUCUC m7a (m7a->m6a) 0.077 no TS No effect
hsa-miR-942 gacAGAGAAGgagaataga
 4
 UCUUCUCU m7b (m6c->m7b) no TS 0.049 -0.04

Mutation Mutation ID Sample Name Cancer Type
chr22:g.27750201G>A COSN14862813 LP6005500-DNA_B03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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