SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001177519
Gene Symbol: MICA
Description: Homo sapiens MHC class I polypeptide-related sequence A (MICA), transcript variant 1 (allele MICA*001), mRNA.
Gene Location: chr6(+):31371370-31383090
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.31415029G>T ICGC_sm412170 RK106_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4418 agcCTGCAGTtcctggatc
 0 CACUGCAG m7b (m6b->m7b) no TS -0.129 -0.17
hsa-miR-492 agcctgCAGGTCCTggatc
 0 AGGACCUG m8a Disrupted -0.709 -0.516 0.21
hsa-miR-509-3-5p agcCTGCAGTtcctggatc
 0 UACUGCAG m7b (m6b->m7b) no TS -0.101 No effect
hsa-miR-509-5p agcCTGCAGTtcctggatc
 0 UACUGCAG m7b (m6b->m7b) no TS -0.11 -0.01
hsa-miR-873-5p agcctgcaGTTCCTGgatc
 0 GCAGGAAC m7b Created -0.268 -0.409 -0.01

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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