SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001204142 |
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Gene Symbol: | MBD1 |
Description: | Homo sapiens methyl-CpG binding domain protein 1 (MBD1), transcript variant 6, mRNA. |
Gene Location: | chr18(-):47795215-47808144 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr18:g.50269740G>A | ICGC_1431358 | TCGA-D1-A103-01A-11D-A10M-09 | UterineCorpusEndometrioidCarcinoma(TCGA,US) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4267 |
cacgagcacGAGCTGGAac |
0 | UCCAGCUC | m8a | (m8a->m7a) | -0.499 | -0.309 |
0.49 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr18:g.50269764G>C | 9_79637 | CRC-7-Tumor | Colorectal adenocarcinoma | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3909 |
ggagaccGAGGACAcagtg |
16 |
UGUCCUCU | m7a | Disrupted | -0.262 | -0.151 |
1.86 |