SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001204137
Gene Symbol: MBD1
Description: Homo sapiens methyl-CpG binding domain protein 1 (MBD1), transcript variant 6, mRNA.
Gene Location: chr18(-):47797411-47808144
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.50271118T>C COSN7361571 8062306 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4755-3p gatgagaCCTGGCagtgtc
 9
 AGCCAGGC m6b Disrupted -0.160000 no TS 5.970000
hsa-miR-5006-5p gatgagaCCTGGCAgtgtc
 9
 UUGCCAGG m7b Disrupted -0.237000 no TS 4.660000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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