SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001030048
Gene Symbol: KLK3
Description: Homo sapiens kallikrein-related peptidase 3 (KLK3), transcript variant 3, mRNA.
Gene Location: chr19(+):51358170-51364020
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.50860373A>T COSN5761580 HX19T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4302 tgaggACACTGataggatg
 2
 CCAGUGUG m6b Created -0.206000 -0.303000 1.220000
hsa-miR-5094 tgaggaCACTGATaggatg
 0 AAUCAGUG m7b Created no TS -0.263000 -4.070000

Mutation Mutation ID Sample Name Cancer Type
chr19:g.50860508A>C 0_562 Prostate cancer
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3180 gcacaaCGCCCCAgacact
 4
 UGGGGCGG m7a Created no TS -0.229 -12.13
hsa-miR-3180-3p gcacaaCGCCCCAgacact
 4
 UGGGGCGG m7a Created no TS -0.229 -13.73
hsa-miR-3196 gcacaaCGCCCCagacact
 4
 CGGGGCGG m6b Created no TS -0.236 -0.03
hsa-miR-4299 gcacaacgCACCAGacact
 4
 GCUGGUGA m6b Disrupted -0.099 no TS 1.71
hsa-miR-4456 gcacaacgCACCAGacact
 4
 CCUGGUGG m6b Disrupted -0.1 no TS 7.11
hsa-miR-4466 gcacaaCGCACCagacact
 4
 GGGUGCGG m6b Disrupted -0.206 no TS 9.41
hsa-miR-4667-5p gcacaacgCCCCAGacact
 4
 ACUGGGGA m6b Created -0.188 -0.306 No effect
hsa-miR-4700-5p gcacaacgCCCCAGAcact
 4
 UCUGGGGA m7a Created -0.188 -0.313 -1.43
hsa-miR-548q gcacaacGCACCAGacact
 4
 GCUGGUGC m7b Disrupted -0.341 no TS 7.01
hsa-miR-637 gcacaacgCCCCAGacact
 4
 ACUGGGGG m6b Created no TS -0.126 -3.53
hsa-miR-675-5p gcacaaCGCACCAgacact
 4
 UGGUGCGG m7a Disrupted -0.213 no TS 3.38

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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