SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
RefSeq ID: | NM_014743 |
---|---|
Gene Symbol: | KIAA0232 |
Description: | Homo sapiens KIAA0232 (KIAA0232), transcript variant 2, mRNA. |
Gene Location: | chr4(+):6784458-6885899 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6881848A>G | COSN6841808 | RK190_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-105-5p |
aaattgtgaGCATTTGAca |
2 |
UCAAAUGC | m8a | (m7b->m8a) | 0.059000 | -0.053000 |
-0.220000 |
hsa-miR-1178 |
aaattGTGAGCAtttgaca |
0 | UUGCUCAC | m7b | Created | -0.167000 | -0.363000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6881982G>C | COSN15103721 | SM-4B296 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-146a-5p |
gcaAGTTCTCtgtgtggtg |
0 | UGAGAACU | m7b | (m6b->m7b) | no TS | -0.020000 |
-3.080000 |
hsa-miR-146b-5p |
gcaAGTTCTCtgtgtggtg |
0 | UGAGAACU | m7b | (m6b->m7b) | no TS | -0.020000 |
-0.920000 |
hsa-miR-3919 |
gcaagTTCTCTGtgtggtg |
0 | GCAGAGAA | m7b | Created | no TS | 0.064000 |
-2.480000 |
hsa-miR-3925-5p |
gcaaGTTCTCTgtgtggtg |
0 | AAGAGAAC | m7b | Created | no TS | 0.005000 |
-0.060000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6882513G>C | COSN5156069 | PD4199a | [NS][NS][NS][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3140-5p |
ggagtcATTCAGGgtctgt |
0 | ACCUGAAU | m7b | Created | no TS | 0.108000 |
-0.500000 |
hsa-miR-345-3p |
ggagtcaTTCAGGGtctgt |
0 | GCCCUGAA | m7b | Created | no TS | 0.014000 |
-0.730000 |
hsa-miR-4725-5p |
ggagtcattCAGGGTCTgt |
0 | AGACCCUG | m8a | (m7b->m8a) | no TS | -0.072000 | No effect |
hsa-miR-504 |
ggagtcattCAGGGTCTgt |
0 | AGACCCUG | m8a | (m7b->m8a) | no TS | -0.081000 |
-4.400000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6882941G>A | COSN9050913 | AOCS-057-1-2 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3124-3p |
gtttattAGGAAAGggctc |
2 |
ACUUUCCU | m7b | Disrupted | 0.060000 | no TS | No effect |
hsa-miR-384 |
gtttatTAGGAAagggctc |
2 |
AUUCCUAG | m6b | Disrupted | 0.073000 | no TS |
0.030000 |
hsa-miR-4263 |
gtttaTTAGAAaagggctc |
7 |
AUUCUAAG | m6b | Created | -0.058000 | 0.070000 |
-0.020000 |
hsa-miR-576-5p |
gtttATTAGAAaagggctc |
0 | AUUCUAAU | m7b | Created | no TS | 0.160000 |
-0.070000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6883538G>A | COSN1300214 | HX17T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6883970A>G | COSN2042622 | RK159_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1283 |
tcggtaaTTGTAGAactac |
0 | UCUACAAA | m7a | Created | no TS | -0.075000 |
-0.080000 |
hsa-miR-4275 |
tcgGTAATTGtagaactac |
6 |
CCAAUUAC | m7b | (m6b->m7b) | 0.121000 | 0.044000 |
-2.150000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.6884157A>G | COSN6841814 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1279 |
aaaaAATATGAactttatt |
2 |
UCAUAUUG | m7a | Created | -0.017000 | -0.120000 |
-1.320000 |
hsa-miR-148a-5p |
aaaaaatatGAACTTTatt |
0 | AAAGUUCU | m7a | (m6b->m7a) | NA | NA |
-1.200000 |
hsa-miR-5007-3p |
aaaaaATATGAactttatt |
0 | AUCAUAUG | m6b | Created | -0.033000 | -0.134000 |
-0.630000 |
hsa-miR-561-3p |
aaaaaatatAAACTTTatt |
0 | CAAAGUUU | m7b | (m7b->m6c) | -0.253000 | -0.072000 |
0.010000 |