SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001100590
Gene Symbol: KIAA0232
Description: Homo sapiens KIAA0232 (KIAA0232), transcript variant 2, mRNA.
Gene Location: chr4(+):6784458-6885899
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.6881848A>G COSN6841808 RK190_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-105-5p aaattgtgaGCATTTGAca
 2
 UCAAAUGC m8a (m7b->m8a) 0.059000 -0.053000 -0.220000
hsa-miR-1178 aaattGTGAGCAtttgaca
 0 UUGCUCAC m7b Created -0.167000 -0.363000 -0.020000

Mutation Mutation ID Sample Name Cancer Type
chr4:g.6881982G>C COSN15103721 SM-4B296 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-146a-5p gcaAGTTCTCtgtgtggtg
 0 UGAGAACU m7b (m6b->m7b) no TS -0.020000 -3.080000
hsa-miR-146b-5p gcaAGTTCTCtgtgtggtg
 0 UGAGAACU m7b (m6b->m7b) no TS -0.020000 -0.920000
hsa-miR-3919 gcaagTTCTCTGtgtggtg
 0 GCAGAGAA m7b Created no TS 0.064000 -2.480000
hsa-miR-3925-5p gcaaGTTCTCTgtgtggtg
 0 AAGAGAAC m7b Created no TS 0.005000 -0.060000

Mutation Mutation ID Sample Name Cancer Type
chr4:g.6882513G>C COSN5156069 PD4199a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3140-5p ggagtcATTCAGGgtctgt
 0 ACCUGAAU m7b Created no TS 0.108000 -0.500000
hsa-miR-345-3p ggagtcaTTCAGGGtctgt
 0 GCCCUGAA m7b Created no TS 0.014000 -0.730000
hsa-miR-4725-5p ggagtcattCAGGGTCTgt
 0 AGACCCUG m8a (m7b->m8a) no TS -0.072000 No effect
hsa-miR-504 ggagtcattCAGGGTCTgt
 0 AGACCCUG m8a (m7b->m8a) no TS -0.081000 -4.400000

Mutation Mutation ID Sample Name Cancer Type
chr4:g.6882941G>A COSN9050913 AOCS-057-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3124-3p gtttattAGGAAAGggctc
 2
 ACUUUCCU m7b Disrupted 0.060000 no TS No effect
hsa-miR-384 gtttatTAGGAAagggctc
 2
 AUUCCUAG m6b Disrupted 0.073000 no TS 0.030000
hsa-miR-4263 gtttaTTAGAAaagggctc
 7
 AUUCUAAG m6b Created -0.058000 0.070000 -0.020000
hsa-miR-576-5p gtttATTAGAAaagggctc
 0 AUUCUAAU m7b Created no TS 0.160000 -0.070000


Mutation Mutation ID Sample Name Cancer Type
chr4:g.6883538G>A COSN1300214 HX17T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.6883970A>G COSN2042622 RK159_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1283 tcggtaaTTGTAGAactac
 0 UCUACAAA m7a Created no TS -0.075000 -0.080000
hsa-miR-4275 tcgGTAATTGtagaactac
 6
 CCAAUUAC m7b (m6b->m7b) 0.121000 0.044000 -2.150000

Mutation Mutation ID Sample Name Cancer Type
chr4:g.6884157A>G COSN6841814 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1279 aaaaAATATGAactttatt
 2
 UCAUAUUG m7a Created -0.017000 -0.120000 -1.320000
hsa-miR-148a-5p aaaaaatatGAACTTTatt
 0 AAAGUUCU m7a (m6b->m7a) NA NA -1.200000
hsa-miR-5007-3p aaaaaATATGAactttatt
 0 AUCAUAUG m6b Created -0.033000 -0.134000 -0.630000
hsa-miR-561-3p aaaaaatatAAACTTTatt
 0 CAAAGUUU m7b (m7b->m6c) -0.253000 -0.072000 0.010000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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