SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
RefSeq ID: | NM_134470 |
---|---|
Gene Symbol: | IL1RAP |
Description: | Homo sapiens interleukin 1 receptor accessory protein (IL1RAP), transcript variant 3, mRNA. |
Gene Location: | chr3(+):190231839-190348073 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.190629553A>G | COSN1273800 | BN42T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-197-3p |
ttGTGGTGAAtaaggacaa |
4 |
UUCACCAC | m8a | (m8a->m7a) | -0.575000 | -0.376000 |
0.280000 |
hsa-miR-3680-5p |
ttgtgGTGAGTaaggacaa |
0 | GACUCACU | m6b | Created | -0.141000 | -0.292000 |
-5.100000 |
hsa-miR-4798-3p |
ttgtgGTGAGTaaggacaa |
0 | AACUCACG | m6b | Created | -0.427000 | -0.611000 |
-0.170000 |
hsa-miR-550b-3p |
ttgtggtGAGTAAGgacaa |
0 | UCUUACUC | m7b | Created | no TS | -0.178000 |
-8.590000 |
hsa-miR-197-3p |
ttGTGGTGAAtaaggacaa |
4 |
UUCACCAC | m8a | (m8a->m7a) | -0.575000 | -0.376000 |
0.280000 |
hsa-miR-3680-5p |
ttgtgGTGAGTaaggacaa |
0 | GACUCACU | m6b | Created | -0.141000 | -0.292000 |
-5.100000 |
hsa-miR-4798-3p |
ttgtgGTGAGTaaggacaa |
0 | AACUCACG | m6b | Created | -0.427000 | -0.611000 |
-0.170000 |
hsa-miR-550b-3p |
ttgtggtGAGTAAGgacaa |
0 | UCUUACUC | m7b | Created | no TS | -0.178000 |
-8.590000 |
hsa-miR-197-3p |
ttGTGGTGAAtaaggacaa |
4 |
UUCACCAC | m8a | (m8a->m7a) | -0.575000 | -0.376000 |
0.280000 |
hsa-miR-3680-5p |
ttgtgGTGAGTaaggacaa |
0 | GACUCACU | m6b | Created | -0.141000 | -0.292000 |
-5.100000 |
hsa-miR-4798-3p |
ttgtgGTGAGTaaggacaa |
0 | AACUCACG | m6b | Created | -0.427000 | -0.611000 |
-0.170000 |
hsa-miR-550b-3p |
ttgtggtGAGTAAGgacaa |
0 | UCUUACUC | m7b | Created | no TS | -0.178000 |
-8.590000 |
hsa-miR-197-3p |
ttGTGGTGAAtaaggacaa |
8 |
UUCACCAC | m8a | (m8a->m7a) | -0.575 | -0.376 |
0.28 |
hsa-miR-3680-5p |
ttgtgGTGAGTaaggacaa |
0 | GACUCACU | m6b | Created | -0.141 | -0.292 |
-5.1 |
hsa-miR-4798-3p |
ttgtgGTGAGTaaggacaa |
0 | AACUCACG | m6b | Created | -0.427 | -0.611 |
-0.17 |
hsa-miR-550b-3p |
ttgtggtGAGTAAGgacaa |
0 | UCUUACUC | m7b | Created | no TS | -0.178 |
-8.59 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.190629660A>G | COSN1273801 | HCC94T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.190629975C>G | COSN5147662 | PD4107a | [breast][NS][carcinoma][ductal_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-320a |
aattatatAGCTTTTaata |
0 | AAAAGCUG | m7a | Created | NA | NA |
2.510000 |
hsa-miR-320b |
aattatatAGCTTTTaata |
0 | AAAAGCUG | m7a | Created | NA | NA |
2.510000 |
hsa-miR-320c |
aattatatAGCTTTTaata |
0 | AAAAGCUG | m7a | Created | NA | NA |
2.410000 |
hsa-miR-320d |
aattatatAGCTTTTaata |
0 | AAAAGCUG | m7a | Created | NA | NA |
2.210000 |
hsa-miR-4429 |
aattatatAGCTTTTaata |
0 | AAAAGCUG | m7a | Created | NA | NA |
3.550000 |
hsa-miR-548m |
aattataTACCTTTtaata |
0 | CAAAGGUA | m7b | Disrupted | -0.199000 | no TS |
8.410000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.190630071T>A | COSN8365297 | tumor_4163639 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3148 |
gaatgtttaTTTTCCAaaa |
1 |
UGGAAAAA | m7a | (m7a->m6b) | -0.122000 | -0.063000 |
2.170000 |
hsa-miR-5093 |
gaatgtttaATTTCCaaaa |
0 | AGGAAAUG | m6b | Created | no TS | -0.086000 |
-8.660000 |