SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001167931
Gene Symbol: IL1RAP
Description: Homo sapiens interleukin 1 receptor accessory protein (IL1RAP), transcript variant 3, mRNA.
Gene Location: chr3(+):190231839-190374986
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.190656979G>C COSN15405491 AOCS-167-16-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-541-5p ggctatgATCCTTacaggg
 0 AAAGGAUU m6b Created no TS -0.057000 No effect
hsa-miR-541-5p ggctatgATCCTTacaggg
 0 AAAGGAUU m6b Created no TS -0.057000 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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