| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001167928 |
|---|---|
| Gene Symbol: | IL1RAP |
| Description: | Homo sapiens interleukin 1 receptor accessory protein (IL1RAP), transcript variant 3, mRNA. |
| Gene Location: | chr3(+):190231839-190369308 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.190648997A>G | COSN7841798 | 8067226 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3613-3p |
cctgTTTTTGTatgtctcc |
0 | ACAAAAAA | m7a | Created | NA | NA |
-0.060000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.190649207A>G | COSN7758275 | ASHPC_0008_Pa_P | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-let-7f-2-3p |
ggCTGTATAGtacataacc |
1 |
CUAUACAG | m8a | (m7a->m8a) | -0.092000 | -0.012000 |
0.310000 |
| hsa-miR-1284 |
ggcTGTATAGtacataacc |
0 | UCUAUACA | m7b | (m6b->m7b) | no TS | -0.055000 |
-0.010000 |
| hsa-miR-3924 |
ggctgtataATACATAacc |
0 | AUAUGUAU | m7b | (m7b->m6c) | -0.062000 | 0.032000 | No effect |
| hsa-miR-625-3p |
ggctgTATAGTacataacc |
0 | GACUAUAG | m6b | Created | no TS | -0.008000 | No effect |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.190649708G>T | COSN1937977 | RK061_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1197 |
gtcttaGTGTCCTtgagag |
0 | UAGGACAC | m7b | Created | no TS | -0.115000 |
-0.330000 |
| hsa-miR-3117-5p |
gtctTAGTGTCcttgagag |
0 | AGACACUA | m7b | Created | no TS | -0.048000 | No effect |
| hsa-miR-3922-5p |
gtcttagtGGCCTTGAgag |
0 | UCAAGGCC | m8a | Disrupted | -0.191000 | no TS |
4.790000 |
| hsa-miR-4717-5p |
gtcttaGTGGCCTtgagag |
1 |
UAGGCCAC | m7b | Disrupted | -0.161000 | no TS |
0.020000 |
| hsa-miR-4753-5p |
gtcttagTGGCCTTGagag |
1 |
CAAGGCCA | m8a | Disrupted | -0.102000 | no TS |
-2.380000 |
| hsa-miR-561-5p |
gtcttagtgTCCTTGAgag |
0 | AUCAAGGA | m7b | (m6c->m7b) | no TS | -0.025000 |
-3.760000 |