| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001562 |
|---|---|
| Gene Symbol: | IL18 |
| Description: | Homo sapiens interleukin 18 (interferon-gamma-inducing factor) (IL18), transcript variant 2, mRNA. |
| Gene Location: | chr11(-):112013975-112034840 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr11:g.112143314C>G | ICGC_D2BE586C-2A78-11E2-951E-21FD496BB9B8 | CPCG_0103_Pr_P_P5 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-5691 |
gggcaacaAGAGCAAaact |
0 | UUGCUCUG | m7a | Created | no TS | -0.125 |
-2.81 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr11:g.112143329T>C | ICGC_EB81B664-2A78-11E2-89D1-29FD496BB9B8 | CPCG_0103_Pr_P_P8 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3135b |
attgcgCTCCAGCCtgggc |
0 | GGCUGGAG | m8a | Created | no TS | -0.162 |
-3.13 |
| hsa-miR-3652 |
attgcgcTCCAGCCtgggc |
0 | CGGCUGGA | m7b | Created | no TS | -0.141 |
-3.02 |
| hsa-miR-4430 |
attgcgcTCCAGCCTgggc |
0 | AGGCUGGA | m8a | Created | no TS | -0.141 |
-3.1 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr11:g.112143374C>A | COSN1513992 | RK079_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1203 |
acttgcaCTCCGGaggtag |
0 | CCCGGAGC | m6b | Disrupted | -0.212000 | no TS |
8.990000 |
| hsa-miR-454-3p |
acTTGCACTAcggaggtag |
0 | UAGUGCAA | m8a | (m7b->m8a) | -0.078000 | -0.240000 |
-0.330000 |
| hsa-miR-4671-3p |
actTGCACTAcggaggtag |
0 | UUAGUGCA | m7b | (m6c->m7b) | no TS | -0.160000 |
-6.830000 |
| hsa-miR-1203 |
acttgcaCTCCGGaggtag |
0 | CCCGGAGC | m6b | Disrupted | -0.212 | no TS |
8.99 |
| hsa-miR-454-3p |
acTTGCACTAcggaggtag |
0 | UAGUGCAA | m8a | (m7b->m8a) | -0.078 | -0.24 |
-0.33 |
| hsa-miR-4671-3p |
actTGCACTAcggaggtag |
0 | UUAGUGCA | m7b | (m6c->m7b) | no TS | -0.16 |
-6.83 |