SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001007139 |
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Gene Symbol: | IGF2 |
Description: | Homo sapiens insulin-like growth factor 2 (somatomedin A) (IGF2), transcript variant 1, mRNA. |
Gene Location: | chr11(-):2150346-2170833 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2129357C>T | COSN8641374 | 522_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-602 |
tgtctcctcCCCGTGTCcc |
4 |
GACACGGG | m8a | (m8a->m7a) | -0.407000 | -0.228000 |
2.580000 |
hsa-miR-765 |
tgtCTCCTCCccgtgtccc |
4 |
UGGAGGAG | m7b | (m7b->m6c) | -0.310000 | -0.147000 |
0.250000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2129540G>A | COSN14497060 | 8069334 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-378a-5p |
tgcccattcGTCAGGAcac |
1 |
CUCCUGAC | m7b | (m7b->m6b) | -0.080000 | 0.013000 |
0.010000 |
hsa-miR-4502 |
tgcccatTCATCAGgacac |
0 | GCUGAUGA | m7b | Created | no TS | -0.105000 |
-1.640000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2129630A>G | COSN6998049 | 8034278 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1587 |
ttggacagaAGCCCAAaga |
2 |
UUGGGCUG | m7a | (m7a->m6a) | -0.115000 | no TS | No effect |
hsa-miR-27a-5p |
ttggacagAAGCCCaaaga |
2 |
AGGGCUUA | m6b | Disrupted | -0.139000 | no TS | No effect |
hsa-miR-2861 |
ttggacagAGGCCCaaaga |
0 | GGGGCCUG | m6b | Created | no TS | -0.161000 | No effect |
hsa-miR-3182 |
ttggACAGAAGCccaaaga |
0 | GCUUCUGU | m8a | Disrupted | -0.003000 | no TS | No effect |
hsa-miR-4674 |
ttggacagaAGCCCAaaga |
2 |
CUGGGCUC | m6b | Disrupted | -0.213000 | -0.106000 | No effect |
hsa-miR-4757-5p |
ttggacAGAGGCCcaaaga |
9 |
AGGCCUCU | m7b | Created | -0.144000 | -0.293000 |
-0.950000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2129665G>A | COSN8641375 | 545_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-636 |
tcggCAAGCACcctgtgag |
1 |
UGUGCUUG | m7b | Created | 0.038000 | 0.028000 |
-1.950000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2129866C>T | COSN8217716 | PCSI_0083_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3648 |
ccaccaCCGCGGCgcctag |
1 |
AGCCGCGG | m7b | Disrupted | -0.227000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2129968G>A | COSN8438761 | AOCS-160-1-6 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4330 |
gtcaggcggATCTGAGccc |
0 | CCUCAGAU | m7b | (m6b->m7b) | no TS | 0.064000 |
-1.140000 |
hsa-miR-5100 |
gtcaggcgGATCTGAgccc |
0 | UUCAGAUC | m7b | Created | no TS | 0.089000 |
-1.280000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130417C>T | COSN8438765 | AOCS-113-1-5 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-211-3p |
ttcatctGTCCCTGttgct |
2 |
GCAGGGAC | m7b | Disrupted | -0.417000 | -0.323000 |
1.680000 |
hsa-miR-873-5p |
ttcatctGTTCCTGttgct |
0 | GCAGGAAC | m7b | Created | no TS | -0.040000 |
-5.170000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130441G>C | COSN8438766 | AOCS-166-1-2 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1226-5p |
tatcGCCCTCAttggattt |
0 | GUGAGGGC | m7b | Created | no TS | -0.105000 | No effect |
hsa-miR-3127-5p |
tatcGCCCTGATtggattt |
2 |
AUCAGGGC | m8a | Disrupted | -0.186000 | -0.082000 |
3.110000 |
hsa-miR-3141 |
tatCGCCCTCattggattt |
0 | GAGGGCGG | m7a | (m6b->m7a) | NA | NA |
0.010000 |
hsa-miR-3616-3p |
tatcGCCCTCattggattt |
0 | CGAGGGCA | m6b | Created | no TS | -0.091000 | No effect |
hsa-miR-3918 |
tatcGCCCTGattggattt |
2 |
ACAGGGCC | m6b | Disrupted | -0.081000 | -0.001000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130494C>T | COSN5259185 | HX34T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-517a-3p |
gcaagaacGCACGAagcca |
4 |
AUCGUGCA | m6b | Disrupted | -0.090000 | no TS | No effect |
hsa-miR-517b-3p |
gcaagaacGCACGAagcca |
4 |
AUCGUGCA | m6b | Disrupted | -0.090000 | no TS | No effect |
hsa-miR-517c-3p |
gcaagaacGCACGAagcca |
4 |
AUCGUGCA | m6b | Disrupted | -0.090000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130577A>T | COSN6608581 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1914-3p |
tttttttttACCCCTCCtt |
2 |
GGAGGGGU | m8a | (m8a->m7a) | -0.179000 | -0.047000 | No effect |
hsa-miR-3148 |
tttttTTTTTCCcctcctt |
5 |
UGGAAAAA | m7b | Created | 0.164000 | 0.291000 |
-3.330000 |
hsa-miR-4668-5p |
ttttttTTTTCCCctcctt |
0 | AGGGAAAA | m7b | Created | no TS | -0.031000 |
-4.460000 |
hsa-miR-5194 |
tttttttttACCCCTCctt |
2 |
UGAGGGGU | m7b | (m7b->m6b) | -0.201000 | -0.051000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130588G>T | COSN6608582 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3613-3p |
tttTTTTTTGTtttttttt |
0 | ACAAAAAA | m8a | Disrupted | 0.096000 | no TS |
0.230000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130606C>T | COSN8641376 | 187_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3148 |
ggcaTTTTTCCtttttttt |
5 |
UGGAAAAA | m7b | Disrupted | 0.164000 | 0.062000 |
2.260000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2130989G>A | COSN6998053 | 8016470 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2131624->CAG | cosmic_v64_1870280 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1231 |
cacacagcacaCCAGACAtgcacaca |
0 | GUGUCUGG | m7b | (m6b->m7b) | no TS | -0.004000 |
-1.910000 |
hsa-miR-147a |
cacacagCACACACatgcacaca |
0 | GUGUGUGG | m7a | Disrupted | 0.027000 | 0.028000 | No effect |
hsa-miR-3607-5p |
cacacagcacaCACATGCacaca |
0 | GCAUGUGA | m7a | (m7a->m6a) | 0.110000 | 0.110000 |
0.170000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2131629->CAT | cosmic_v64_1870280 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4728-3p |
cacagcacaCAGCATcacacacatgc |
0 | CAUGCUGA | m6b | Created | NA | NA |
-0.370000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2132018G>C | COSN8641377 | 545_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-147a |
cagCACACACatgagcaca |
2 |
GUGUGUGG | m7a | (m6b->m7a) | 0.027000 | 0.027000 |
-0.010000 |
hsa-miR-3607-5p |
cagcacaCACATGagcaca |
0 | GCAUGUGA | m6b | Created | 0.110000 | 0.139000 |
-0.200000 |
hsa-miR-452-3p |
cagcacaCAGATGAGcaca |
0 | CUCAUCUG | m8a | Disrupted | 0.028000 | no TS |
3.080000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2132075A>G | COSN10082969 | C0076T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1206 |
cacgCATGAACAcagcaca |
1 |
UGUUCAUG | m8a | Disrupted | 0.126000 | 0.139000 |
0.030000 |
hsa-miR-124-5p |
cacgcaTGAACACagcaca |
1 |
CGUGUUCA | m7b | Disrupted | 0.267000 | 0.324000 |
1.370000 |
hsa-miR-5008-3p |
cacgcatgAGCACAGcaca |
1 |
CCUGUGCU | m7b | Created | -0.155000 | -0.166000 |
-0.120000 |
hsa-miR-1206 |
cacgCATGAACAcagcaca |
1 |
UGUUCAUG | m8a | Disrupted | 0.126000 | 0.139000 |
0.030000 |
hsa-miR-124-5p |
cacgcaTGAACACagcaca |
1 |
CGUGUUCA | m7b | Disrupted | 0.267000 | 0.324000 |
1.370000 |
hsa-miR-5008-3p |
cacgcatgAGCACAGcaca |
1 |
CCUGUGCU | m7b | Created | -0.155000 | -0.166000 |
-0.120000 |
hsa-miR-1206 |
cacgCATGAACAcagcaca |
1 |
UGUUCAUG | m8a | Disrupted | 0.126000 | 0.139000 |
0.030000 |
hsa-miR-124-5p |
cacgcaTGAACACagcaca |
1 |
CGUGUUCA | m7b | Disrupted | 0.267000 | 0.324000 |
1.370000 |
hsa-miR-5008-3p |
cacgcatgAGCACAGcaca |
1 |
CCUGUGCU | m7b | Created | -0.155000 | -0.166000 |
-0.120000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2132078T>C | COSN10082970 | C0076T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1206 |
gcacacgCATGAACAcagc |
1 |
UGUUCAUG | m8a | Disrupted | 0.126000 | 0.139000 |
0.040000 |
hsa-miR-124-5p |
gcacacgcaTGAACACagc |
1 |
CGUGUUCA | m7b | (m7b->m6b) | 0.267000 | 0.334000 |
0.820000 |
hsa-miR-517a-3p |
gcacacGCACGAacacagc |
4 |
AUCGUGCA | m6b | Created | -0.090000 | -0.232000 |
-0.680000 |
hsa-miR-517b-3p |
gcacacGCACGAacacagc |
4 |
AUCGUGCA | m6b | Created | -0.090000 | -0.232000 |
-0.680000 |
hsa-miR-517c-3p |
gcacacGCACGAacacagc |
4 |
AUCGUGCA | m6b | Created | -0.090000 | -0.232000 |
-0.910000 |
hsa-miR-1206 |
gcacacgCATGAACAcagc |
1 |
UGUUCAUG | m8a | Disrupted | 0.126000 | 0.139000 |
0.040000 |
hsa-miR-124-5p |
gcacacgcaTGAACACagc |
1 |
CGUGUUCA | m7b | (m7b->m6b) | 0.267000 | 0.334000 |
0.820000 |
hsa-miR-517a-3p |
gcacacGCACGAacacagc |
4 |
AUCGUGCA | m6b | Created | -0.090000 | -0.232000 |
-0.680000 |
hsa-miR-517b-3p |
gcacacGCACGAacacagc |
4 |
AUCGUGCA | m6b | Created | -0.090000 | -0.232000 |
-0.680000 |
hsa-miR-517c-3p |
gcacacGCACGAacacagc |
4 |
AUCGUGCA | m6b | Created | -0.090000 | -0.232000 |
-0.910000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.2132081G>A | COSN15589267 | C0006T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-147a |
acagCACACACatgaacac |
2 |
GUGUGUGG | m7a | Created | 0.027000 | 0.024000 |
0.040000 |
hsa-miR-3607-5p |
acagcacaCACATGaacac |
0 | GCAUGUGA | m6b | Created | 0.110000 | 0.116000 |
-0.940000 |
hsa-miR-147a |
acagCACACACatgaacac |
2 |
GUGUGUGG | m7a | Created | 0.027000 | 0.024000 |
0.040000 |
hsa-miR-3607-5p |
acagcacaCACATGaacac |
0 | GCAUGUGA | m6b | Created | 0.110000 | 0.116000 |
-0.940000 |