SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_176891
Gene Symbol: IFNE
Description: Homo sapiens interferon, epsilon (IFNE), mRNA.
Gene Location: chr9(-):21480838-21482312
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.21480971T>A COSN1376674 BN20T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1277-5p gtatatATATATTTatctg
 1
 AAAUAUAU m8a Disrupted -0.207000 -0.072000 2.550000
hsa-miR-5011-5p gtaTATATATAtttatctg
 1
 UAUAUAUA m8a Disrupted -0.458000 -0.203000 0.550000
hsa-miR-1277-5p gtatatATATATTTatctg
 1
 AAAUAUAU m8a Disrupted -0.207000 -0.072000 2.550000
hsa-miR-5011-5p gtaTATATATAtttatctg
 1
 UAUAUAUA m8a Disrupted -0.458000 -0.203000 0.550000
hsa-miR-1277-5p gtatatATATATTTatctg
 0 AAAUAUAU m8a Disrupted -0.207 -0.072 2.55
hsa-miR-5011-5p gtaTATATATAtttatctg
 0 UAUAUAUA m8a Disrupted -0.458 -0.203 0.55

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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