SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_182536
Gene Symbol: GKN2
Description: Homo sapiens gastrokine 2 (GKN2), mRNA.
Gene Location: chr2(-):69172363-69180102
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.68945300T>C COSN1241835 HCC65T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4775 aagtcAAATTAAattcttt
 9
 UUAAUUUU m7a Disrupted 0.040000 no TS 0.850000
hsa-miR-4775 aagtcAAATTAAattcttt
 9
 UUAAUUUU m7a Disrupted 0.040000 no TS 0.850000
hsa-miR-4775 aagtcAAATTAAattcttt
 9
 UUAAUUUU m7a Disrupted 0.04 no TS 0.85

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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