SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001494
Gene Symbol: GDI2
Description: Homo sapiens GDP dissociation inhibitor 2 (GDI2), transcript variant 2, mRNA.
Gene Location: chr10(-):5807185-5855512
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.5765785A>G COSN5878431 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4453 tttaaCCAAGCTggctttt
 16
 GAGCUUGG m7b Created -0.182000 -0.429000 -0.480000
hsa-miR-4538 tttaaCCAAGCTggctttt
 16
 GAGCUUGG m7b Created -0.210000 -0.466000 -4.670000
hsa-miR-4676-5p tttaaccaaACTGGCTttt
 0 GAGCCAGU m7b (m7b->m6b) -0.293000 no TS No effect
hsa-miR-575 tttaaccaaACTGGCTttt
 0 GAGCCAGU m7b (m7b->m6b) -0.293000 no TS 0.290000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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