SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
RefSeq ID: | NM_001115156 |
---|---|
Gene Symbol: | GDI2 |
Description: | Homo sapiens GDP dissociation inhibitor 2 (GDI2), transcript variant 2, mRNA. |
Gene Location: | chr10(-):5807185-5855512 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr10:g.5765785A>G | COSN5878431 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4453 |
tttaaCCAAGCTggctttt |
16 |
GAGCUUGG | m7b | Created | -0.182000 | -0.429000 |
-0.480000 |
hsa-miR-4538 |
tttaaCCAAGCTggctttt |
16 |
GAGCUUGG | m7b | Created | -0.210000 | -0.466000 |
-4.670000 |
hsa-miR-4676-5p |
tttaaccaaACTGGCTttt |
0 | GAGCCAGU | m7b | (m7b->m6b) | -0.293000 | no TS | No effect |
hsa-miR-575 |
tttaaccaaACTGGCTttt |
0 | GAGCCAGU | m7b | (m7b->m6b) | -0.293000 | no TS |
0.290000 |