SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000151
Gene Symbol: G6PC
Description: Homo sapiens glucose-6-phosphatase, catalytic subunit (G6PC), mRNA.
Gene Location: chr17(+):41052814-41065386
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.42912654G>T COSN1196996 HX17T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3613-3p tttTTTTTTGagacagggt
 4
 ACAAAAAA m7b (m7b->m6b) 0.248000 0.148000 -0.170000
hsa-miR-371a-5p ttttttTTTGAGacagggt
 2
 ACUCAAAC m6b Disrupted 0.079000 0.043000 0.030000
hsa-miR-371b-5p tttttTTTTGAGacagggt
 5
 ACUCAAAA m7b Disrupted 0.030000 0.024000 0.010000
hsa-miR-373-5p tttttTTTTGAGacagggt
 5
 ACUCAAAA m7b Disrupted 0.032000 0.026000 0.030000
hsa-miR-616-5p tttttTTTTGAGacagggt
 5
 ACUCAAAA m7b Disrupted 0.008000 0.023000 0.340000
hsa-miR-3613-3p tttTTTTTTGagacagggt
 2
 ACAAAAAA m7b (m7b->m6b) 0.248 0.148 -0.17
hsa-miR-371a-5p ttttttTTTGAGacagggt
 2
 ACUCAAAC m6b Disrupted 0.079 0.043 0.03
hsa-miR-371b-5p tttttTTTTGAGacagggt
 2
 ACUCAAAA m7b Disrupted 0.03 0.024 0.01
hsa-miR-373-5p tttttTTTTGAGacagggt
 2
 ACUCAAAA m7b Disrupted 0.032 0.026 0.03
hsa-miR-616-5p tttttTTTTGAGacagggt
 2
 ACUCAAAA m7b Disrupted 0.008 0.023 0.34

Mutation Mutation ID Sample Name Cancer Type
chr17:g.42913065G>A ICGC_AFAFACD6-2A78-11E2-8335-12FD496BB9B8 CPCG_0102_Pr_P_P2 ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3189-3p gcctCCCAAGGtgctagga
 2
 CCCUUGGG m7b Disrupted -0.154 no TS 1.81
hsa-miR-5682 gcctcccaaGGTGCTAgga
 0 GUAGCACC m7b (m7b->m6c) -0.189 no TS 4.07

Mutation Mutation ID Sample Name Cancer Type
chr17:g.42913109G>A COSN15085993 LP6005690-DNA_A02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4742-5p gccctccTTGCCTGttttt
 5
 UCAGGCAA m7b Disrupted -0.224000 -0.096000 1.010000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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