SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000147
Gene Symbol: FUCA1
Description: Homo sapiens fucosidase, alpha-L- 1, tissue (FUCA1), mRNA.
Gene Location: chr1(-):24171571-24194859
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.23845394C>A COSN1100944 HCC67T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1256 ttgcttactCAATGCCTtt
 1
 AGGCAUUG m8a (m8a->m7a) -0.212000 no TS 5.260000
hsa-miR-1256 ttgcttactCAATGCCTtt
 0 AGGCAUUG m8a (m8a->m7a) -0.212 no TS 5.26

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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