| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| RefSeq ID: | NM_001164473 |
|---|---|
| Gene Symbol: | FNBP1L |
| Description: | Homo sapiens formin binding protein 1-like (FNBP1L), transcript variant 1, mRNA. |
| Gene Location: | chr1(+):93913687-94020218 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93552692C>T | 0_46 | Lung cancer | ||||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4524b-3p |
tattgCTGTCTaatcaata |
7 |
GAGACAGG | m6b | Disrupted | -0.141 | no TS |
0.02 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93552828T>A | COSN1463856 | RK032_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-181b-3p |
ctgTCAGTGActgcctgcg |
0 | CUCACUGA | m7b | (m6b->m7b) | no TS | -0.049000 |
-0.610000 |
| hsa-miR-2682-5p |
ctgtcagtgACTGCCTGcg |
2 |
CAGGCAGU | m8a | (m7b->m8a) | -0.229000 | -0.312000 |
-0.090000 |
| hsa-miR-3166 |
ctgtcagTGTCTGCctgcg |
16 |
CGCAGACA | m7b | Disrupted | -0.087000 | no TS |
2.250000 |
| hsa-miR-34b-5p |
ctgtcagtgACTGCCTgcg |
2 |
UAGGCAGU | m7b | (m6c->m7b) | -0.201000 | -0.274000 | No effect |
| hsa-miR-4420 |
ctgTCAGTGACtgcctgcg |
0 | GUCACUGA | m8a | Created | no TS | -0.039000 |
-4.560000 |
| hsa-miR-449c-5p |
ctgtcagtgACTGCCTgcg |
2 |
UAGGCAGU | m7b | (m6c->m7b) | -0.192000 | -0.265000 | No effect |
| hsa-miR-4704-3p |
ctgtcaGTGACTGcctgcg |
12 |
UCAGUCAC | m7b | Created | -0.186000 | -0.282000 | No effect |
| hsa-miR-181b-3p |
ctgTCAGTGActgcctgcg |
0 | CUCACUGA | m7b | (m6b->m7b) | no TS | -0.049 |
-0.61 |
| hsa-miR-2682-5p |
ctgtcagtgACTGCCTGcg |
0 | CAGGCAGU | m8a | (m7b->m8a) | -0.229 | -0.312 |
-0.09 |
| hsa-miR-3166 |
ctgtcagTGTCTGCctgcg |
16 |
CGCAGACA | m7b | Disrupted | -0.087 | no TS |
2.25 |
| hsa-miR-34b-5p |
ctgtcagtgACTGCCTgcg |
0 | UAGGCAGU | m7b | (m6c->m7b) | -0.201 | -0.274 | No effect |
| hsa-miR-4420 |
ctgTCAGTGACtgcctgcg |
0 | GUCACUGA | m8a | Created | no TS | -0.039 |
-4.56 |
| hsa-miR-449c-5p |
ctgtcagtgACTGCCTgcg |
0 | UAGGCAGU | m7b | (m6c->m7b) | -0.192 | -0.265 | No effect |
| hsa-miR-4704-3p |
ctgtcaGTGACTGcctgcg |
0 | UCAGUCAC | m7b | Created | -0.186 | -0.282 | No effect |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93553587->T | cosmic_v64_1870281 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1323 |
gatcatGTTTTGAtaattac |
0 | UCAAAACU | m7a | Created | 0.118000 | 0.165000 |
-0.010000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93553668A>G | COSN15258826 | LP6007520-DNA_A01 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-376c |
taatgaTCTATGTgcactt |
13 |
AACAUAGA | m7b | Disrupted | -0.071000 | no TS |
-0.050000 |
| hsa-miR-5694 |
taATGATCTGtgtgcactt |
13 |
CAGAUCAU | m8a | (m7a->m8a) | -0.121000 | -0.066000 |
0.050000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93553692G>C | COSN10056433 | C0063T | [kidney][NS][other][neoplasm] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-33a-5p |
tgtaaAATGCAatttctgt |
0 | GUGCAUUG | m6b | Created | no TS | -0.023000 |
-6.220000 |
| hsa-miR-33b-5p |
tgtaaAATGCAatttctgt |
0 | GUGCAUUG | m6b | Created | no TS | -0.023000 |
-0.010000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93553731T>C | COSN8638891 | 3844_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3529-3p |
gaTTGTTGTTagtgctcct |
6 |
AACAACAA | m8a | (m8a->m7a) | -0.031000 | -0.003000 |
0.190000 |
| hsa-miR-888-3p |
gattgtTGTCAGTgctcct |
12 |
GACUGACA | m7b | Created | -0.059000 | -0.112000 | No effect |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93554109A>G | COSN1110247 | HX14T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-5000-5p |
gcagctagTGAACTataaa |
0 | CAGUUCAG | m6b | Created | no TS | -0.066000 |
-0.010000 |
| hsa-miR-5000-5p |
gcagctagTGAACTataaa |
0 | CAGUUCAG | m6b | Created | no TS | -0.066 |
-0.01 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.93554400C>G | COSN6952928 | 8062307 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4671-5p |
atttgCTTCGGTaggaggc |
0 | ACCGAAGA | m7a | Created | NA | NA |
-0.100000 |