| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| RefSeq ID: | NM_054034 |
|---|---|
| Gene Symbol: | FN1 |
| Description: | Homo sapiens fibronectin 1 (FN1), transcript variant 3, mRNA. |
| Gene Location: | chr2(-):216279383-216300791 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr2:g.215414691A>T | COSN14587261 | 8067507 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1279 |
acaaaCAATATGtggtcaa |
5 |
UCAUAUUG | m7b | Disrupted | -0.186000 | no TS |
0.630000 |
| hsa-miR-4719 |
acaaacaATTTGTGgtcaa |
0 | UCACAAAU | m7b | Created | no TS | -0.121000 |
2.160000 |