SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_021032
Gene Symbol: FGF12
Description: Homo sapiens fibroblast growth factor 12 (FGF12), transcript variant 2, mRNA.
Gene Location: chr3(-):191857181-192126838
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.192139609G>C COSN9541845 AOCS-141-3-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3928 tttgtctTTCCTCCaagta
 0 GGAGGAAC m7a Created NA NA -0.350000
hsa-miR-765 tttgtcttTCCTCCAagta
 0 UGGAGGAG m7a Created -0.051000 -0.221000 No effect
hsa-miR-766-5p tttgtctTTCCTCCaagta
 0 AGGAGGAA m7b Created -0.093000 -0.434000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192139731C>T COSN7842463 8067232 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2115-5p agtaacagaTGGAAGCaaa
 3
 AGCUUCCA m7b (m6b->m7b) -0.176000 -0.409000 -2.470000
hsa-miR-340-3p agtaacAGACGGAagcaaa
 0 UCCGUCUC m7a Disrupted -0.224000 no TS 4.520000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192140055A>C COSN6426371 HX36T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-340-5p ccaCTTTATAAtaaaaaag
 11
 UUAUAAAG m8a Disrupted -0.011000 -0.019000 No effect
hsa-miR-4795-3p ccactttATAATAaaaaag
 2
 AUAUUAUU m6b Disrupted 0.472000 0.408000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192140152G>T COSN1273938 HX17T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3065-5p ttgaTTTGTTGtctttagt
 6
 UCAACAAA m7b Created 0.019000 -0.034000 -0.200000
hsa-miR-3529-3p ttgatTTGTTGTctttagt
 8
 AACAACAA m7b Created -0.113000 -0.216000 -0.750000
hsa-miR-3617 ttgatttgtTGTCTTTagt
 5
 AAAGACAU m7a (m6a->m7a) 0.057000 0.057000 -0.020000
hsa-miR-3667-5p ttgatttgtGGTCTTTagt
 4
 AAAGACCC m7a (m7a->m6a) -0.093000 -0.093000 No effect
hsa-miR-4719 ttgATTTGTGgtctttagt
 0 UCACAAAU m7b (m7b->m6c) -0.132000 -0.076000 2.480000
hsa-miR-548ao-3p ttgatttgtGGTCTTTagt
 0 AAAGACCG m7a (m7a->m6a) NA NA 1.090000
hsa-miR-641 ttgatttgtTGTCTTTagt
 5
 AAAGACAU m7a (m6a->m7a) 0.057000 0.057000 -0.010000
hsa-miR-7-1-3p ttgATTTGTTGtctttagt
 1
 CAACAAAU m8a Created 0.442000 0.482000 -1.080000
hsa-miR-7-2-3p ttgATTTGTTGtctttagt
 1
 CAACAAAU m8a Created 0.451000 0.500000 -0.230000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192140221A>G COSN1938617 RK048_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-643 gttcTACAAGTatatatgt
 2
 ACUUGUAU m7a Created -0.190000 -0.190000 No effect
hsa-miR-643 gttcTACAAGTatatatgt
 2
 ACUUGUAU m7a Created -0.190000 -0.190000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192140614C>T COSN5042220 HX24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1286 gtaGTCCTGCggtgccact
 2
 UGCAGGAC m7b (m7b->m6c) -0.078000 no TS No effect
hsa-miR-140-3p gtagtcCTGTGGTgccact
 13
 UACCACAG m7b Created -0.129000 -0.132000 -2.760000
hsa-miR-4700-3p gtaGTCCTGTGgtgccact
 0 CACAGGAC m8a Created no TS -0.049000 -1.920000
hsa-miR-593-5p gtagtcctgTGGTGCCact
 4
 AGGCACCA m7b (m6b->m7b) -0.085000 -0.173000 -1.230000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192140645C>T COSN9541846 AOCS-139-6-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-138-2-3p ataAAATAGCaacaatcta
 10
 GCUAUUUC m7a (m7a->m6b) 0.267000 0.267000 -0.060000
hsa-miR-744-3p ataaaataGCAACAatcta
 2
 CUGUUGCC m6b Disrupted -0.042000 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192140864T>A COSN6759694 RK053_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3184-3p ttcaGAGACTTTtgtgctt
 0 AAAGUCUC m8a Disrupted 0.021000 0.015000 No effect
hsa-miR-4719 ttcagagacATTTGTGctt
 0 UCACAAAU m7b (m6b->m7b) -0.132000 0.018000 No effect
hsa-miR-593-3p ttCAGAGACAtttgtgctt
 0 UGUCUCUG m8a (m7b->m8a) -0.002000 -0.002000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192141063G>A COSN7842464 8033471 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4520a-5p attggctACGCAGatataa
 1
 CCUGCGUG m6b Disrupted -0.088000 no TS 2.240000
hsa-miR-4520b-5p attggctACGCAGatataa
 1
 CCUGCGUG m6b Disrupted -0.088000 no TS 2.240000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192141334A>G COSN15138217 LP6005500-DNA_D01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3130-5p tattcACTGGGTttttaaa
 0 UACCCAGU m7b Created no TS -0.102000 -0.020000
hsa-miR-4276 tatTCACTGAGtttttaaa
 9
 CUCAGUGA m8a Disrupted -0.204000 -0.150000 0.070000
hsa-miR-4482-5p tattcACTGGGTTtttaaa
 0 AACCCAGU m8a Created no TS -0.112000 -0.240000
hsa-miR-548aa tattcactgGGTTTTTaaa
 3
 AAAAACCA m7a (m6a->m7a) 0.069000 0.069000 No effect
hsa-miR-548ac tattcactgGGTTTTTaaa
 0 CAAAAACC m7b (m6b->m7b) 0.222000 0.232000 -0.650000
hsa-miR-548ae tattcactgAGTTTTTaaa
 0 CAAAAACU m7b (m7b->m6b) 0.259000 0.197000 No effect
hsa-miR-548ah-3p tattcactgAGTTTTTaaa
 0 CAAAAACU m7b (m7b->m6b) 0.259000 0.197000 0.020000
hsa-miR-548aj-3p tattcactgAGTTTTTAaa
 0 UAAAAACU m8a (m8a->m7a) 0.259000 0.197000 No effect
hsa-miR-548am-3p tattcactgAGTTTTTaaa
 0 CAAAAACU m7b (m7b->m6b) 0.259000 0.197000 0.010000
hsa-miR-548ap-3p tattcactgGGTTTTTaaa
 3
 AAAAACCA m7a (m6a->m7a) 0.078000 0.078000 -0.010000
hsa-miR-548aq-3p tattcactgAGTTTTTaaa
 0 CAAAAACU m7b (m7b->m6b) 0.259000 0.197000 No effect
hsa-miR-548as-3p tattcactGGGTTTTtaaa
 0 UAAAACCC m7b Created -0.010000 -0.032000 -0.060000
hsa-miR-548d-3p tattcactgGGTTTTTaaa
 0 CAAAAACC m7b (m6b->m7b) 0.236000 0.252000 -0.180000
hsa-miR-548e tattcactgAGTTTTTaaa
 0 AAAAACUG m7a (m7a->m6a) NA NA 0.140000
hsa-miR-548f tattcactgAGTTTTTaaa
 0 AAAAACUG m7a (m7a->m6a) NA NA No effect
hsa-miR-548h-3p tattcactgGGTTTTTaaa
 0 CAAAAACC m7b (m6b->m7b) 0.222000 0.224000 -0.040000
hsa-miR-548t-3p tattcactgGGTTTTTaaa
 3
 AAAAACCA m7a (m6a->m7a) 0.069000 0.069000 No effect
hsa-miR-548x-3p tattcactgAGTTTTTAaa
 0 UAAAAACU m8a (m8a->m7a) 0.259000 0.197000 No effect
hsa-miR-548z tattcactgGGTTTTTaaa
 0 CAAAAACC m7b (m6b->m7b) 0.222000 0.224000 -0.040000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192141475G>T COSN6426372 HX36T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-146a-3p tttagTTCAGAGaattaat
 0 CCUCUGAA m7b Disrupted 0.098000 0.038000 0.010000
hsa-miR-301a-5p tttagtTCAGAGaattaat
 0 GCUCUGAC m6b Disrupted 0.030000 0.026000 No effect
hsa-miR-3191-5p tttagttCAGAGAattaat
 0 CUCUCUGG m6b Disrupted 0.011000 no TS 0.060000
hsa-miR-3921 tttagtTCAGAGAattaat
 0 UCUCUGAG m7a Disrupted 0.050000 0.033000 No effect
hsa-miR-4539 tttAGTTCAGagaattaat
 3
 GCUGAACU m7b (m7b->m6c) -0.147000 -0.116000 5.010000
hsa-miR-4653-5p tttagtTCAGAGAattaat
 0 UCUCUGAG m7a Disrupted 0.050000 0.036000 0.010000
hsa-miR-5571-5p tttagttcaGAGAATTaat
 0 CAAUUCUC m7b (m7b->m6b) -0.070000 -0.064000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192141771C>A COSN1938618 RK027_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3152-3p cataaaTAACACAattgat
 2
 UGUGUUAG m7a Disrupted 0.021000 no TS 0.230000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192141935A>G COSN14466764 8068554 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-129-5p aacCAAAAAGaaaaagaaa
 1
 CUUUUUGC m7a (m6b->m7a) 0.424000 0.285000 0.140000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192142030C>T COSN1938619 RK002_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-630 aaaAGAATACccctggggc
 4
 AGUAUUCU m7b (m7b->m6c) 0.037000 -0.037000 0.200000
hsa-miR-630 aaaAGAATACccctggggc
 4
 AGUAUUCU m7b (m7b->m6c) 0.037000 -0.037000 0.200000
hsa-miR-630 aaaAGAATACccctggggc
 0 AGUAUUCU m7b (m7b->m6c) 0.037 -0.037 0.2

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192142239G>C COSN9717565 C0065T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4299 cctTCACCAGgtatcctat
 0 GCUGGUGA m7b (m7b->m6c) -0.025000 no TS No effect
hsa-miR-619 ccttcaCCAGGTatcctat
 0 GACCUGGA m6b Disrupted -0.097000 -0.069000 0.190000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143460T>C COSN5531409 RK038_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-302c-5p tataaactATGTTAAtacc
 0 UUUAACAU m7b Disrupted 0.158000 0.226000 0.010000
hsa-miR-3143 tataaactATGTTAatacc
 0 AUAACAUU m6b Disrupted 0.268000 0.263000 No effect
hsa-miR-376c tataaaCTATGTTaatacc
 1
 AACAUAGA m7a Disrupted -0.016000 -0.016000 0.510000
hsa-miR-4803 tataaacTATGTTAatacc
 0 UAACAUAA m7a Disrupted 0.146000 0.174000 No effect


Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143484T>G COSN8923109 SS6003317 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143720G>A COSN9541847 AOCS-116-1-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-338-5p aactgTATTGTTattagta
 0 AACAAUAU m7a Disrupted 0.038000 0.038000 0.090000
hsa-miR-369-3p aactGTATTATTattagta
 8
 AAUAAUAC m8a Created 0.215000 0.075000 0.060000
hsa-miR-374c-5p aacTGTATTATtattagta
 4
 AUAAUACA m8a Created 0.122000 -0.011000 0.010000
hsa-miR-5692b aactgtatTATTATTagta
 8
 AAUAAUAU m7a Created 0.271000 0.271000 -0.020000
hsa-miR-5692c aactgtatTATTATTagta
 8
 AAUAAUAU m7a Created 0.271000 0.271000 -0.010000
hsa-miR-655 aacTGTATTATtattagta
 4
 AUAAUACA m8a Created 0.125000 -0.026000 0.010000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143887T>A COSN15510191 AOCS-135-8-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-449b-3p aagacctaGTGGCTaagat
 2
 CAGCCACA m6b Disrupted -0.211000 -0.038000 0.030000
hsa-miR-449b-3p aagacctaGTGGCTaagat
 2
 CAGCCACA m6b Disrupted -0.211000 -0.038000 0.030000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143888G>T COSN15500491 AOCS-135-8-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-449b-3p caagacctaGTGGCTaaga
 2
 CAGCCACA m6b Disrupted -0.211000 -0.038000 0.030000
hsa-miR-4662a-5p caagacctaTTGGCTAAga
 3
 UUAGCCAA m8a (m7a->m8a) -0.173000 -0.383000 -0.110000
hsa-miR-449b-3p caagacctaGTGGCTaaga
 2
 CAGCCACA m6b Disrupted -0.211000 -0.038000 0.030000
hsa-miR-4662a-5p caagacctaTTGGCTAAga
 3
 UUAGCCAA m8a (m7a->m8a) -0.173000 -0.383000 -0.110000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143939T>A COSN1938620 RK010_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1243 ccatttcctTCCAGTaaat
 3
 AACUGGAU m6b Disrupted -0.148000 no TS 0.700000
hsa-miR-1252 ccatTTCCTTCcagtaaat
 8
 AGAAGGAA m7b Disrupted -0.270000 -0.111000 0.020000
hsa-miR-3654 ccatttcctTCCAGTaaat
 3
 GACUGGAC m6b Disrupted -0.304000 -0.153000 0.780000
hsa-miR-4533 ccattTCCTTCCAgtaaat
 8
 UGGAAGGA m8a Disrupted -0.519000 -0.152000 0.420000
hsa-miR-1243 ccatttcctTCCAGTaaat
 3
 AACUGGAU m6b Disrupted -0.148000 no TS 0.700000
hsa-miR-1252 ccatTTCCTTCcagtaaat
 8
 AGAAGGAA m7b Disrupted -0.270000 -0.111000 0.020000
hsa-miR-3654 ccatttcctTCCAGTaaat
 3
 GACUGGAC m6b Disrupted -0.304000 -0.153000 0.780000
hsa-miR-4533 ccattTCCTTCCAgtaaat
 8
 UGGAAGGA m8a Disrupted -0.519000 -0.152000 0.420000
hsa-miR-1243 ccatttcctTCCAGTaaat
 0 AACUGGAU m6b Disrupted -0.148 no TS 0.7
hsa-miR-1252 ccatTTCCTTCcagtaaat
 0 AGAAGGAA m7b Disrupted -0.27 -0.111 0.02
hsa-miR-3654 ccatttcctTCCAGTaaat
 0 GACUGGAC m6b Disrupted -0.304 -0.153 0.78
hsa-miR-4533 ccattTCCTTCCAgtaaat
 0 UGGAAGGA m8a Disrupted -0.519 -0.152 0.42

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143973T>C COSN1938621 RK170_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-149-3p ctcatCCCTCCCccttccc
 0 AGGGAGGG m7b Created no TS -0.229000 -2.000000
hsa-miR-3202 ctcatCCCTTCCccttccc
 11
 UGGAAGGG m7b Disrupted -0.761000 -0.515000 3.390000
hsa-miR-4271 ctcatccCTTCCCCttccc
 2
 GGGGGAAG m7b Disrupted -0.165000 no TS 0.240000
hsa-miR-4716-3p ctcatcccTCCCCCTTccc
 2
 AAGGGGGA m8a Created -0.282000 -0.474000 0.220000
hsa-miR-4723-5p ctcatccCTCCCCCttccc
 0 UGGGGGAG m7b Created no TS -0.289000 -2.970000
hsa-miR-4725-3p ctcatccCTTCCCCttccc
 2
 UGGGGAAG m7b Disrupted -0.174000 no TS 3.420000
hsa-miR-4728-5p ctcatCCCTCCCccttccc
 0 UGGGAGGG m7b Created no TS -0.248000 -1.450000
hsa-miR-4747-5p ctcatcCCTTCCCcttccc
 4
 AGGGAAGG m7b Disrupted -0.861000 -0.678000 0.010000
hsa-miR-5196-5p ctcatcCCTTCCCcttccc
 4
 AGGGAAGG m7b Disrupted -0.968000 -0.757000 -0.900000
hsa-miR-5698 ctcatccCTCCCCCttccc
 0 UGGGGGAG m7b Created no TS -0.252000 -1.820000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.192143991C>A COSN6759695 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3154 tctcCCCTTCTtccctctc
 4
 CAGAAGGG m7b Disrupted 0.000000 no TS -0.140000
hsa-miR-3179 tctCCCCTTCTtccctctc
 2
 AGAAGGGG m8a Disrupted 0.000000 -0.214000 -0.030000
hsa-miR-3185 tctcccCTTCTTCcctctc
 8
 AGAAGAAG m7b Disrupted 0.066000 0.080000 -0.060000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser