SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_001002901
Gene Symbol:	FCRLB
Description:	Homo sapiens Fc receptor-like B (FCRLB), mRNA.
Gene Location:	chr1(+):161692456-161697933
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.161727786C>T			COSN6005392		RK308_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3178	aaaggaGCGCCCacgaagt	2	GGGGCGCG	m6b	Disrupted	-0.276000	no TS	3.290000
hsa-miR-3677-3p	aaaggagcgCCCACGAagt	2	CUCGUGGG	m7b	(m7b->m6c)	-0.479000	-0.196000	2.070000

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.161727990G>T			COSN15576014		C0007T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3613-3p	agttTTTTTTGTatttaag	2	ACAAAAAA	m8a	Created	-0.015000	-0.059000	-1.260000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Germline mutations in target sites of miRNAs in somatic mutation table

Location	SNP ID	Ancestral Allele	Allele	miR ID	Conservation	miRSite	FuncClass	Validation	context+ score change
161727988	rs188645495	T	T	hsa-miR-3613-3p	2	gtTTTTTTGgtat	Disrupted	N	-0.015

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