| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_014808 |
|---|---|
| Gene Symbol: | FARP2 |
| Description: | Homo sapiens FERM, RhoGEF and pleckstrin domain protein 2 (FARP2), mRNA. |
| Gene Location: | chr2(+):242295663-242434256 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr2:g.241494696G>C | COSN5130206 | PD3904a | [breast][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-103a-2-5p |
acctctagAGAAGCagaaa |
2 |
AGCUUCUU | m6b | Disrupted | -0.093000 | no TS | No effect |
| hsa-miR-1251 |
acctCTAGAGaagcagaaa |
1 |
ACUCUAGC | m6b | Disrupted | -0.087000 | no TS |
3.870000 |
| hsa-miR-3655 |
acctctaGACAAGCagaaa |
0 | GCUUGUCG | m7a | Created | NA | NA |
-0.340000 |
| hsa-miR-4684-5p |
acctcTAGAGAagcagaaa |
1 |
CUCUCUAC | m6b | Disrupted | -0.045000 | no TS |
3.272000 |
| hsa-miR-517-5p |
accTCTAGAGaagcagaaa |
1 |
CCUCUAGA | m7b | (m7b->m6b) | -0.255000 | no TS | No effect |
| hsa-miR-518d-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.116000 | -0.116000 |
-0.180000 |
| hsa-miR-518e-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.079000 | -0.079000 |
-0.180000 |
| hsa-miR-518f-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.116000 | -0.116000 |
-0.180000 |
| hsa-miR-519a-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.079000 | -0.079000 |
-0.180000 |
| hsa-miR-519b-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.079000 | -0.079000 |
-0.180000 |
| hsa-miR-519c-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.079000 | -0.079000 |
-0.180000 |
| hsa-miR-520c-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.116000 | -0.116000 |
-0.180000 |
| hsa-miR-522-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.079000 | -0.079000 |
-0.180000 |
| hsa-miR-523-5p |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.079000 | -0.079000 |
-0.180000 |
| hsa-miR-526a |
acCTCTAGAGaagcagaaa |
1 |
CUCUAGAG | m8a | (m8a->m7a) | -0.116000 | -0.116000 |
-0.180000 |
| hsa-miR-942 |
acctctAGAGAAGcagaaa |
1 |
UCUUCUCU | m7b | Disrupted | -0.109000 | no TS |
2.480000 |