SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000130
Gene Symbol: F5
Description: Homo sapiens coagulation factor V (proaccelerin, labile factor) (F5), mRNA.
Gene Location: chr1(-):169481191-169555769
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.169512748T>C COSN9365898 C0099T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-127-5p atatgagAGCTTCAaacat
 0 CUGAAGCU m7b Created no TS -0.139000 No effect
hsa-miR-4738-3p atatgagAGTTTCAaacat
 2
 UGAAACUG m7a Disrupted -0.143000 -0.155000 0.080000

Mutation Mutation ID Sample Name Cancer Type
chr1:g.169514167A>C COSN1092075 HCC29T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-103a-2-5p ttatacAAGAAGCTtttat
 1
 AGCUUCUU m8a Disrupted -0.201000 no TS No effect
hsa-miR-320a ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.340000
hsa-miR-320b ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.210000
hsa-miR-320c ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.280000
hsa-miR-320d ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 -0.290000
hsa-miR-4429 ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.179000 -0.070000
hsa-miR-578 ttatACAAGAAGcttttat
 7
 CUUCUUGU m8a Disrupted -0.402000 -0.229000 No effect
hsa-miR-103a-2-5p ttatacAAGAAGCTtttat
 1
 AGCUUCUU m8a Disrupted -0.201000 no TS No effect
hsa-miR-320a ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.340000
hsa-miR-320b ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.210000
hsa-miR-320c ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.280000
hsa-miR-320d ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 -0.290000
hsa-miR-4429 ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.179000 -0.070000
hsa-miR-578 ttatACAAGAAGcttttat
 7
 CUUCUUGU m8a Disrupted -0.402000 -0.229000 No effect
hsa-miR-103a-2-5p ttatacAAGAAGCTtttat
 1
 AGCUUCUU m8a Disrupted -0.201000 no TS No effect
hsa-miR-320a ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.340000
hsa-miR-320b ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.210000
hsa-miR-320c ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 0.280000
hsa-miR-320d ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188000 -0.290000
hsa-miR-4429 ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.179000 -0.070000
hsa-miR-578 ttatACAAGAAGcttttat
 7
 CUUCUUGU m8a Disrupted -0.402000 -0.229000 No effect
hsa-miR-103a-2-5p ttatacAAGAAGCTtttat
 0 AGCUUCUU m8a Disrupted -0.201 no TS No effect
hsa-miR-320a ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188 0.34
hsa-miR-320b ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188 0.21
hsa-miR-320c ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188 0.28
hsa-miR-320d ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.188 -0.29
hsa-miR-4429 ttatacaagCAGCTTTTat
 0 AAAAGCUG m8a (m7a->m8a) no TS -0.179 -0.07
hsa-miR-578 ttatACAAGAAGcttttat
 0 CUUCUUGU m8a Disrupted -0.402 -0.229 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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