SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000129 |
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Gene Symbol: | F13A1 |
Description: | Homo sapiens coagulation factor XIII, A1 polypeptide (F13A1), mRNA. |
Gene Location: | chr6(-):6144310-6320924 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.6144109C>T | COSN7889307 | 8031121 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-100-3p |
taatagAAGCTTaaaataa |
6 |
CAAGCUUG | m6b | Disrupted | -0.162000 | no TS |
0.260000 |
hsa-miR-4503 |
taatagaaGCTTAAAataa |
9 |
UUUAAGCA | m7a | Disrupted | -0.139000 | no TS |
4.080000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.6145522G>C | COSN6325984 | RK175_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1228-3p |
gacttAGGTGTGAagaccc |
7 |
UCACACCU | m8a | Disrupted | -0.516000 | -0.141000 |
0.360000 |
hsa-miR-377-3p |
gacttagGTGTGAagaccc |
6 |
AUCACACA | m6b | Disrupted | -0.110000 | no TS |
0.060000 |
hsa-miR-412 |
gacttaggtGTGAAGaccc |
9 |
ACUUCACC | m6b | Disrupted | -0.150000 | -0.083000 |
0.300000 |