SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000127
Gene Symbol: EXT1
Description: Homo sapiens exostosin 1 (EXT1), mRNA.
Gene Location: chr8(-):118811601-119124058
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.117799485C>A COSN8061628 8034061 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-26a-1-3p gtcccaAGAATAGGttgtg
 0 CCUAUUCU m8a Created no TS -0.118000 -4.800000
hsa-miR-26a-2-3p gtcccaAGAATAGGttgtg
 0 CCUAUUCU m8a Created no TS -0.118000 -4.720000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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