SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000122
Gene Symbol: ERCC3
Description: Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) (ERCC3), mRNA.
Gene Location: chr2(-):128014865-128051752
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.127257419A>G COSN1786356 RK062_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-205-5p gggttttATGAAGGAggag
 0 UCCUUCAU m8a Created no TS -0.312000 -4.890000
hsa-miR-3163 gggTTTTATAaaggaggag
 0 UAUAAAAU m7a (m7a->m6b) 0.099000 no TS 2.310000
hsa-miR-340-5p gggtTTTATAAaggaggag
 0 UUAUAAAG m7a Disrupted 0.069000 no TS 5.350000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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