SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000119 |
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Gene Symbol: | EPB42 |
Description: | Homo sapiens erythrocyte membrane protein band 4.2 (EPB42), transcript variant 1, mRNA. |
Gene Location: | chr15(-):43489425-43513323 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr15:g.43197249C>T | COSN5397329 | RK143_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-299-5p |
aatcTAAACCAaacatgtg |
2 |
UGGUUUAC | m7a | Disrupted | -0.115000 | no TS |
3.830000 |
hsa-miR-29b-2-5p |
aatctAAACCAaacatgtg |
5 |
CUGGUUUC | m6b | Disrupted | -0.070000 | no TS |
10.520000 |
hsa-miR-659-3p |
aatctaAACCAAacatgtg |
4 |
CUUGGUUC | m6b | Disrupted | -0.077000 | no TS |
2.440000 |