SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_173717
Gene Symbol: ELAC2
Description: Homo sapiens elaC homolog 2 (E. coli) (ELAC2), transcript variant 3, mRNA.
Gene Location: chr17(-):12894928-12921381
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.12992352G>T COSN6650610 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3194-3p tgctaCAGAGCagggtctg
 2
 AGCUCUGC m6b Disrupted -0.058000 no TS No effect
hsa-miR-5691 tgctaCAGAGCAgggtctg
 2
 UUGCUCUG m7b Disrupted -0.080000 no TS 0.040000


Mutation Mutation ID Sample Name Cancer Type
chr17:g.12992612C>T COSN6650611 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.12992667C>G COSN6650612 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3649 aggcttggGGTCCCacata
 0 AGGGACCU m6b Created no TS -0.199000 -1.370000
hsa-miR-4648 aggcttgggGTCCCACAta
 0 UGUGGGAC m8a (m7a->m8a) -0.153000 -0.382000 -6.100000
hsa-miR-505-5p aggcttgGGCTCCCacata
 1
 GGGAGCCA m7a Disrupted -0.179000 -0.179000 1.450000
hsa-miR-711 aggcttgGGGTCCCacata
 0 GGGACCCA m7a Created NA NA -2.740000
hsa-miR-920 aggcttggGCTCCCacata
 2
 GGGGAGCU m6b Disrupted -0.316000 -0.124000 3.410000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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