| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_201284 |
|---|---|
| Gene Symbol: | EGFR |
| Description: | Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA. |
| Gene Location: | chr7(+):55086724-55238738 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr7:g.55170724C>A | COSN8304266 | ASHPC_0015_Pa_P | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3126-3p |
tcctcgctGCCAGATGatt |
2 |
CAUCUGGC | m8a | Disrupted | -0.499000 | -0.305000 |
1.820000 |
| hsa-miR-4720-5p |
tcctcgcTGCCAGatgatt |
2 |
CCUGGCAU | m6b | Disrupted | -0.141000 | no TS |
0.290000 |
| hsa-miR-4799-3p |
tcctcgcTGCCAGatgatt |
2 |
ACUGGCAU | m6b | Disrupted | -0.134000 | no TS |
0.620000 |
| hsa-miR-5588-5p |
tcctcgcTGCCAGatgatt |
2 |
ACUGGCAU | m6b | Disrupted | -0.148000 | no TS |
0.260000 |
| hsa-miR-885-3p |
tcctCGCTGCCagatgatt |
3 |
AGGCAGCG | m7b | Disrupted | -0.621000 | -0.163000 |
1.200000 |