SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
RefSeq ID: | NM_000110 |
---|---|
Gene Symbol: | DPYD |
Description: | Homo sapiens dihydropyrimidine dehydrogenase (DPYD), transcript variant 1, mRNA. |
Gene Location: | chr1(-):97543299-98386615 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.97078115A>C | COSN10057062 | C0054T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.97078138A>G | COSN5380068 | RK076_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-26b-3p |
gtttGAACAGagctcaaag |
0 | CCUGUUCU | m6b | Created | no TS | -0.089000 |
-0.290000 |
hsa-miR-27b-5p |
gtttgaacaAAGCTCaaag |
0 | AGAGCUUA | m6b | Disrupted | -0.131000 | no TS |
0.160000 |
hsa-miR-3670 |
gtttgaacaGAGCTCaaag |
0 | AGAGCUCA | m6b | Created | no TS | -0.147000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.97078560C>G | COSN14523745 | 8034061 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1261 |
aaaatgTATCCAaggaaac |
2 |
AUGGAUAA | m6b | Disrupted | -0.115000 | no TS |
0.120000 |
hsa-miR-1915-5p |
aaaatgtatGCAAGGaaac |
0 | ACCUUGCC | m6b | Created | no TS | -0.168000 |
-1.600000 |
hsa-miR-212-5p |
aaaatgtatCCAAGGaaac |
12 |
ACCUUGGC | m6b | Disrupted | -0.159000 | no TS |
4.890000 |
hsa-miR-3189-3p |
aaaatgtatCCAAGGaaac |
12 |
CCCUUGGG | m6b | Disrupted | -0.161000 | no TS |
4.680000 |
hsa-miR-502-5p |
aaaatgtatGCAAGGAaac |
13 |
AUCCUUGC | m7b | (m6b->m7b) | -0.126000 | -0.387000 |
-3.290000 |
hsa-miR-5689 |
aaaaTGTATGCaaggaaac |
2 |
AGCAUACA | m7b | Created | -0.142000 | -0.509000 |
-0.680000 |
hsa-miR-1261 |
aaaatgTATCCAaggaaac |
2 |
AUGGAUAA | m6b | Disrupted | -0.115000 | no TS |
0.120000 |
hsa-miR-1915-5p |
aaaatgtatGCAAGGaaac |
0 | ACCUUGCC | m6b | Created | no TS | -0.168000 |
-1.600000 |
hsa-miR-212-5p |
aaaatgtatCCAAGGaaac |
12 |
ACCUUGGC | m6b | Disrupted | -0.159000 | no TS |
4.890000 |
hsa-miR-3189-3p |
aaaatgtatCCAAGGaaac |
12 |
CCCUUGGG | m6b | Disrupted | -0.161000 | no TS |
4.680000 |
hsa-miR-502-5p |
aaaatgtatGCAAGGAaac |
13 |
AUCCUUGC | m7b | (m6b->m7b) | -0.126000 | -0.387000 |
-3.290000 |
hsa-miR-5689 |
aaaaTGTATGCaaggaaac |
2 |
AGCAUACA | m7b | Created | -0.142000 | -0.509000 |
-0.680000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.97078847A>G | COSN5745752 | HCC162 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-551b-5p |
aaaatatgTGATTTCaaaa |
13 |
GAAAUCAA | m7a | Created | -0.075000 | -0.075000 | No effect |
hsa-miR-5580-3p |
aaaATATGTGatttcaaaa |
0 | CACAUAUG | m7a | (m6b->m7a) | -0.092000 | no TS |
0.060000 |
hsa-miR-551b-5p |
aaaatatgTGATTTCaaaa |
13 |
GAAAUCAA | m7a | Created | -0.075000 | -0.075000 | No effect |
hsa-miR-5580-3p |
aaaATATGTGatttcaaaa |
0 | CACAUAUG | m7a | (m6b->m7a) | -0.092000 | no TS |
0.060000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.97078896A>G | COSN4892539 | PCSI_0083_Pa_X | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3160-3p |
cttgtgtTCAGCTCTttcc |
5 |
AGAGCUGA | m8a | Disrupted | -0.276000 | no TS |
0.270000 |
hsa-miR-4537 |
cttgtgtTCGGCTCtttcc |
0 | UGAGCCGA | m7b | Created | no TS | -0.369000 |
-15.530000 |