SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001348
Gene Symbol: DAPK3
Description: Homo sapiens death-associated protein kinase 3 (DAPK3), mRNA.
Gene Location: chr19(-):3958451-3969826
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.3958663G>T COSN8260336 PCSI_0048_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1224-3p gggagGGTGGGatggacgg
 1
 CCCCACCU m6b Disrupted -0.123000 no TS 4.450000
hsa-miR-1260a gggagGGTGGGATggacgg
 1
 AUCCCACC m8a Disrupted -0.116000 no TS 0.010000
hsa-miR-1260b gggagGGTGGGATggacgg
 1
 AUCCCACC m8a Disrupted -0.116000 no TS 0.350000

Mutation Mutation ID Sample Name Cancer Type
chr19:g.3958664G>T COSN8260337 PCSI_0048_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1224-3p ggggagGGTGGGatggacg
 1
 CCCCACCU m6b Disrupted -0.123000 no TS 4.700000
hsa-miR-1260a ggggagGGTGGGATggacg
 1
 AUCCCACC m8a Disrupted -0.116000 no TS 0.010000
hsa-miR-1260b ggggagGGTGGGATggacg
 1
 AUCCCACC m8a Disrupted -0.116000 no TS 0.350000

Mutation Mutation ID Sample Name Cancer Type
chr19:g.3959053G>A COSN5760473 HCC59 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1205 tcggCCTGCAGtgggggcg
 0 UCUGCAGG m7b Created no TS -0.090000 -0.060000
hsa-miR-1273g-3p tcggcctGCAGTGGgggcg
 1
 ACCACUGC m7b Created 0.000000 0.000000 -5.340000
hsa-miR-1280 tcggcctgCGGTGGGggcg
 0 UCCCACCG m7b Disrupted -0.270000 -0.142000 No effect
hsa-miR-4286 tcggcctgcAGTGGGGgcg
 1
 ACCCCACU m7b (m6b->m7b) 0.000000 -0.170000 -0.280000
hsa-miR-4418 tcggcCTGCAGTGggggcg
 0 CACUGCAG m8a Created no TS -0.041000 -5.310000
hsa-miR-509-3-5p tcggcCTGCAGTgggggcg
 0 UACUGCAG m7b Created no TS -0.022000 No effect
hsa-miR-509-5p tcggcCTGCAGTgggggcg
 0 UACUGCAG m7b Created no TS -0.022000 No effect
hsa-miR-1205 tcggCCTGCAGtgggggcg
 0 UCUGCAGG m7b Created no TS -0.090000 -0.060000
hsa-miR-1273g-3p tcggcctGCAGTGGgggcg
 1
 ACCACUGC m7b Created 0.000000 0.000000 -5.340000
hsa-miR-1280 tcggcctgCGGTGGGggcg
 0 UCCCACCG m7b Disrupted -0.270000 -0.142000 No effect
hsa-miR-4286 tcggcctgcAGTGGGGgcg
 1
 ACCCCACU m7b (m6b->m7b) 0.000000 -0.170000 -0.280000
hsa-miR-4418 tcggcCTGCAGTGggggcg
 0 CACUGCAG m8a Created no TS -0.041000 -5.310000
hsa-miR-509-3-5p tcggcCTGCAGTgggggcg
 0 UACUGCAG m7b Created no TS -0.022000 No effect
hsa-miR-509-5p tcggcCTGCAGTgggggcg
 0 UACUGCAG m7b Created no TS -0.022000 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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