SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_018659
Gene Symbol: CYTL1
Description: Homo sapiens cytokine-like 1 (CYTL1), mRNA.
Gene Location: chr4(-):5016313-5021197
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.5015090A>G COSN1298091 HX17T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1264 cccAGACTTGatgggccag
 2
 CAAGUCUU m7a (m6b->m7a) -0.066000 no TS No effect
hsa-miR-1264 cccAGACTTGatgggccag
 0 CAAGUCUU m7a (m6b->m7a) -0.066 no TS No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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