SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000567 |
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Gene Symbol: | CRP |
Description: | Homo sapiens C-reactive protein, pentraxin-related (CRP), mRNA. |
Gene Location: | chr1(-):159682078-159684379 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.159712822T>C | COSN8965497 | SS6003320 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-148a-5p |
ccaAGAACTTaaatgactg |
2 |
AAAGUUCU | m7b | (m7b->m6c) | -0.158000 | no TS |
0.160000 |
hsa-miR-148b-5p |
ccaAGAACTTaaatgactg |
0 | AAGUUCUG | m7a | (m7a->m6b) | NA | NA | No effect |
hsa-miR-3168 |
ccaAGAACTCaaatgactg |
1 |
GAGUUCUA | m7a | (m6b->m7a) | -0.024000 | -0.024000 |
0.030000 |
hsa-miR-5696 |
ccaagaactTAAATGActg |
1 |
CUCAUUUA | m7b | (m7b->m6b) | 0.069000 | 0.079000 |
0.880000 |
hsa-miR-579 |
ccaagaactCAAATGActg |
1 |
UUCAUUUG | m7b | (m6b->m7b) | 0.080000 | 0.077000 |
0.080000 |
hsa-miR-644b-3p |
ccaagaactCAAATGActg |
1 |
UUCAUUUG | m7b | (m6b->m7b) | 0.086000 | 0.065000 |
-0.030000 |