SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001079534 |
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Gene Symbol: | CPEB1 |
Description: | Homo sapiens cytoplasmic polyadenylation element binding protein 1 (CPEB1), transcript variant 2, mRNA. |
Gene Location: | chr15(-):83211950-83240573 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr15:g.82543705T>C | COSN6643092 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3182 |
tggggttgACAGAAGtttt |
0 | GCUUCUGU | m7b | Created | no TS | -0.049000 | No effect |
hsa-miR-505-3p |
tgggGTTGACagaagtttt |
0 | CGUCAACA | m6b | Created | no TS | -0.050000 | No effect |
hsa-miR-3182 |
tggggttgACAGAAGtttt |
0 | GCUUCUGU | m7b | Created | no TS | -0.049000 | No effect |
hsa-miR-505-3p |
tgggGTTGACagaagtttt |
0 | CGUCAACA | m6b | Created | no TS | -0.050000 | No effect |