| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_006091 |
|---|---|
| Gene Symbol: | CORO2B |
| Description: | Homo sapiens coronin, actin binding protein, 2B (CORO2B), transcript variant 2, mRNA. |
| Gene Location: | chr15(+):68871307-69020144 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr15:g.68726100G>A | COSN7247203 | 8050103 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1908 |
aggacCCCCGCCtaccacc |
2 |
CGGCGGGG | m7b | Disrupted | -0.256000 | no TS | No effect |
| hsa-miR-4447 |
aggaCCCCCACCtaccacc |
2 |
GGUGGGGG | m8a | Created | -0.136000 | -0.330000 | No effect |
| hsa-miR-4472 |
aggaCCCCCACCtaccacc |
2 |
GGUGGGGG | m8a | Created | -0.136000 | -0.321000 | No effect |
| hsa-miR-4787-5p |
aggACCCCCGCctaccacc |
1 |
GCGGGGGU | m8a | Disrupted | -0.228000 | no TS | No effect |
| hsa-miR-663a |
aggacCCCCGCCTaccacc |
2 |
AGGCGGGG | m8a | Disrupted | -0.265000 | no TS |
0.010000 |
| hsa-miR-92a-2-5p |
aggacCCCCACCtaccacc |
3 |
GGGUGGGG | m7b | Created | -0.095000 | -0.269000 | No effect |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr15:g.68726678A>C | COSN8815704 | SS6003317 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3117-5p |
gtagggatTAGTGTCcccc |
3 |
AGACACUA | m7b | Disrupted | -0.142000 | -0.105000 |
0.010000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr15:g.68727043T>A | COSN8590283 | 1255_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1343 |
tcgtcctCCAGGAagctga |
1 |
CUCCUGGG | m6b | Created | -0.157000 | -0.164000 | No effect |
| hsa-miR-2115-5p |
tcgtcctccTGGAAGCTga |
1 |
AGCUUCCA | m8a | (m8a->m7b) | -0.290000 | -0.294000 |
0.010000 |
| hsa-miR-3690 |
tcgtccTCCAGGaagctga |
0 | ACCUGGAC | m6b | Created | no TS | -0.049000 |
-0.630000 |
| hsa-miR-4254 |
tcgtcCTCCAGGaagctga |
4 |
GCCUGGAG | m7b | Created | -0.093000 | -0.255000 |
-1.710000 |
| hsa-miR-4459 |
tcgtCCTCCTGGaagctga |
5 |
CCAGGAGG | m8a | Disrupted | -0.482000 | -0.402000 | No effect |
| hsa-miR-4768-3p |
tcgtcCTCCTGGaagctga |
5 |
CCAGGAGA | m7a | Disrupted | -0.112000 | -0.112000 | No effect |
| hsa-miR-516a-3p |
tcgtcctccAGGAAGCtga |
1 |
UGCUUCCU | m7b | (m6c->m7b) | -0.218000 | -0.255000 | No effect |
| hsa-miR-516b-3p |
tcgtcctccAGGAAGCtga |
1 |
UGCUUCCU | m7b | (m6c->m7b) | -0.218000 | -0.255000 | No effect |
| hsa-miR-665 |
tcgtcCTCCTGGaagctga |
6 |
ACCAGGAG | m7b | Disrupted | -0.197000 | no TS |
2.100000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr15:g.68727051G>C | COSN1683101 | RK052_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-27b-5p |
ctggAAGCTCaggctgaga |
0 | AGAGCUUA | m6b | Created | no TS | -0.007000 |
-0.010000 |
| hsa-miR-4293 |
ctggaagcTCAGGCTGaga |
0 | CAGCCUGA | m8a | Created | no TS | -0.050000 |
-8.270000 |