SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_015198
Gene Symbol:	COBL
Description:	Homo sapiens cordon-bleu homolog (mouse) (COBL), mRNA.
Gene Location:	chr7(-):51083908-51384515
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr7:g.51016393T>C			COSN15414164		AOCS-167-16-X		[ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr7:g.51017518C>A			COSN8026246		8047833		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-125a-3p	agaaaccCACCTGTaatat	0	ACAGGUGA	m7a	Disrupted	NA	NA	0.010000
hsa-miR-4259	agaaaCCCAACTGtaatat	5	CAGUUGGG	m8a	Created	-0.078000	-0.332000	No effect
hsa-miR-552	agaaaccCACCTGTaatat	0	AACAGGUG	m7b	Disrupted	-0.444000	-0.074000	6.000000
hsa-miR-582-5p	agaaacccAACTGTAAtat	0	UUACAGUU	m8a	Created	no TS	-0.181000	-0.970000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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