SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001010852
Gene Symbol: CLVS2
Description: Homo sapiens clavesin 2 (CLVS2), mRNA.
Gene Location: chr6(+):123317581-123385063
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.123063783A>G COSN2138648 RK137_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5092 atccccttCGTGGATTaga
 0 AAUCCACG m8a Created no TS -0.283000 -4.780000
hsa-miR-5092 atccccttCGTGGATTaga
 0 AAUCCACG m8a Created no TS -0.283 -4.78

Mutation Mutation ID Sample Name Cancer Type
chr6:g.123063859T>A COSN9294557 AOCS-088-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5583-3p gaaaccgaCATATTCatgt
 0 GAAUAUGG m7a Created NA NA 5.090000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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