| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_030782 |
|---|---|
| Gene Symbol: | CLPTM1L |
| Description: | Homo sapiens CLPTM1-like (CLPTM1L), mRNA. |
| Gene Location: | chr5(-):1317999-1345002 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr5:g.1318281G>A | COSN5069197 | HCC113T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-106a-3p |
agaCATTGCAttttctgtg |
0 | CUGCAAUG | m7b | (m6c->m7b) | no TS | -0.206000 |
-0.950000 |
| hsa-miR-106a-3p |
agaCATTGCAttttctgtg |
0 | CUGCAAUG | m7b | (m6c->m7b) | no TS | -0.206000 |
-0.950000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr5:g.1318303T>A | COSN4893753 | CME_0001_Pa_C | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-105-5p |
ggaaGCATTTGgaggaatt |
2 |
UCAAAUGC | m7b | Disrupted | -0.158000 | no TS |
2.390000 |
| hsa-miR-155-5p |
ggaAGCATTAggaggaatt |
0 | UUAAUGCU | m7b | (m6c->m7b) | no TS | -0.141000 |
0.970000 |
| hsa-miR-4691-5p |
ggaagcattTGGAGGAatt |
1 |
GUCCUCCA | m7b | (m7b->m6b) | -0.459000 | -0.188000 |
3.240000 |
| hsa-miR-5193 |
ggaagcattAGGAGGAatt |
0 | UCCUCCUC | m7a | (m6a->m7a) | no TS | -0.175000 |
-0.010000 |
| hsa-miR-660-3p |
ggaagcattAGGAGGaatt |
0 | ACCUCCUG | m6b | Created | no TS | -0.166000 |
-3.540000 |