| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001257387 |
|---|---|
| Gene Symbol: | CHEK2 |
| Description: | Homo sapiens checkpoint kinase 2 (CHEK2), transcript variant 3, mRNA. |
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| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr22:g.28687854C>G | COSN8612538 | 202_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-128 |
tctttCACTGTGtcatctt |
0 | UCACAGUG | m7b | Created | no TS | -0.262000 |
-5.350000 |
| hsa-miR-3681-3p |
tctttCACTGTGTcatctt |
0 | ACACAGUG | m8a | Created | no TS | -0.234000 |
-7.920000 |
| hsa-miR-425-5p |
tctttcactGTGTCATctt |
0 | AAUGACAC | m7b | (m6b->m7b) | no TS | -0.205000 |
-0.690000 |
| hsa-miR-4797-5p |
tctttcACTCTGTCatctt |
0 | GACAGAGU | m8a | Disrupted | -0.182000 | no TS |
4.790000 |
| hsa-miR-5586-3p |
tcttTCACTCTGtcatctt |
0 | CAGAGUGA | m8a | Disrupted | -0.240000 | no TS |
8.220000 |
| hsa-miR-642a-3p |
tctttcacTGTGTCatctt |
0 | AGACACAU | m6b | Created | no TS | -0.166000 |
-14.920000 |
| hsa-miR-642b-3p |
tctttcacTGTGTCatctt |
0 | AGACACAU | m6b | Created | no TS | -0.166000 |
-14.620000 |
| hsa-miR-759 |
tctttCACTCTGtcatctt |
0 | GCAGAGUG | m7b | Disrupted | -0.258000 | no TS |
5.030000 |