| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_005441 |
|---|---|
| Gene Symbol: | CHAF1B |
| Description: | Homo sapiens chromatin assembly factor 1, subunit B (p60) (CHAF1B), mRNA. |
| Gene Location: | chr21(+):37757688-37789125 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr21:g.36416728A>G | COSN5452941 | RK125_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3124-3p |
aggaagatgGGAAAGTaat |
0 | ACUUUCCU | m7a | (m6b->m7a) | NA | NA |
-16.680000 |
| hsa-miR-452-3p |
aggaAGATGAGaaagtaat |
0 | CUCAUCUG | m7a | Disrupted | NA | NA |
2.440000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr21:g.36416772G>A | COSN10026208 | C0031T | [kidney][NS][other][neoplasm] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3671 |
agagTATTTGAagtgattg |
2 |
AUCAAAUA | m7b | Disrupted | -0.151000 | no TS |
2.250000 |
| hsa-miR-607 |
agagtATTTGAAgtgattg |
2 |
GUUCAAAU | m7b | Disrupted | -0.082000 | no TS |
2.290000 |