SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000078 |
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Gene Symbol: | CETP |
Description: | Homo sapiens cholesteryl ester transfer protein, plasma (CETP), mRNA. |
Gene Location: | chr16(+):56995834-57017756 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr16:g.56983778G>A | COSN1188261 | HCC33T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-136-5p |
gagtacggaAATGGAGatt |
1 |
ACUCCAUU | m7b | (m6c->m7b) | -0.095000 | -0.251000 |
-1.220000 |
hsa-miR-3605-3p |
gagtACGGAGatggagatt |
0 | CCUCCGUG | m6b | Disrupted | -0.199000 | no TS |
7.390000 |
hsa-miR-136-5p |
gagtacggaAATGGAGatt |
1 |
ACUCCAUU | m7b | (m6c->m7b) | -0.095000 | -0.251000 |
-1.220000 |
hsa-miR-3605-3p |
gagtACGGAGatggagatt |
0 | CCUCCGUG | m6b | Disrupted | -0.199000 | no TS |
7.390000 |
hsa-miR-136-5p |
gagtacggaAATGGAGatt |
0 | ACUCCAUU | m7b | (m6c->m7b) | -0.095 | -0.251 |
-1.22 |
hsa-miR-3605-3p |
gagtACGGAGatggagatt |
0 | CCUCCGUG | m6b | Disrupted | -0.199 | no TS |
7.39 |