SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000075
Gene Symbol: CDK4
Description: Homo sapiens cyclin-dependent kinase 4 (CDK4), mRNA.
Gene Location: chr12(-):58142002-58146164
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.57748464G>A cosmic_v64_1760547 Leukemia/T-ALL
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3157-3p acactgagAGGGCAatctt
 0 CUGCCCUA m6b Disrupted -0.205 no TS 2.96
hsa-miR-4290 acactgaGAGGGCAatctt
 0 UGCCCUCC m7a Disrupted -0.214 no TS 6.18
hsa-miR-4297 acactgaGAAGGCAatctt
 0 UGCCUUCC m7a Created no TS -0.162 -0.51
hsa-miR-5581-5p acactgaGAAGGCaatctt
 0 AGCCUUCC m6b Created no TS -0.155 -2.31
hsa-miR-874 acactgagAGGGCAatctt
 0 CUGCCCUG m6b Disrupted -0.181 no TS 0.77

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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