SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000074
Gene Symbol: CD40LG
Description: Homo sapiens CD40 ligand (CD40LG), mRNA.
Gene Location: chrX(+):135730335-135742549
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.136659612C>A ICGC_ssm_v3_152321 HCC86T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3918 aaacgGGCCCTGctccata
 9
 ACAGGGCC m7b Disrupted -0.362 -0.122 0.02

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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