SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_005582
Gene Symbol: CD180
Description: Homo sapiens CD180 molecule (CD180), mRNA.
Gene Location: chr5(-):66478103-66492617
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.67182676A>G COSN6925514 RK216_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3135a gaaccttCTAGGCAagtac
 0 UGCCUAGG m7a Disrupted -0.172000 no TS 13.820000
hsa-miR-4774-3p gaaccttcTAGGCAAgtac
 0 AUUGCCUA m7b Disrupted -0.132000 no TS 6.250000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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