SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_005508
Gene Symbol: CCR4
Description: Homo sapiens chemokine (C-C motif) receptor 4 (CCR4), mRNA.
Gene Location: chr3(+):32993065-32996403
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.32954528G>A cosmic_v64_1820270 Pancreatic
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-20a-3p tgaAATGCAGagtcaatga
 1
 ACUGCAUU m7b (m7b->m6b) -0.326 no TS 3.67
hsa-miR-3680-3p tgaaATGCAAAgtcaatga
 0 UUUUGCAU m7b Created no TS -0.143 -0.4
hsa-miR-4522 tgaaatgCAGAGTCAatga
 0 UGACUCUG m8a Disrupted -0.402 no TS 5.53

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser