| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| RefSeq ID: | NM_001752 |
|---|---|
| Gene Symbol: | CAT |
| Description: | Homo sapiens catalase (CAT), mRNA. |
| Gene Location: | chr11(+):34460471-34493607 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr11:g.34471530C>T | COSN1132058 | HCC122T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-33a-5p |
gtgcaAATGCAagctagtg |
0 | GUGCAUUG | m6b | Disrupted | -0.056000 | no TS |
2.140000 |
| hsa-miR-33b-5p |
gtgcaAATGCAagctagtg |
0 | GUGCAUUG | m6b | Disrupted | -0.056000 | no TS |
2.040000 |
| hsa-miR-4327 |
gtgcaaaTGCAAGCtagtg |
7 |
GGCUUGCA | m7b | Disrupted | -0.271000 | no TS |
1.370000 |
| hsa-miR-4453 |
gtgcaaatgCAAGCTagtg |
5 |
GAGCUUGG | m6b | Disrupted | -0.135000 | no TS |
2.140000 |
| hsa-miR-4538 |
gtgcaaatgCAAGCTagtg |
5 |
GAGCUUGG | m6b | Disrupted | -0.135000 | no TS |
0.190000 |
| hsa-miR-5579-3p |
gtgcaaatgTAAGCTAgtg |
0 | UUAGCUUA | m7b | (m6c->m7b) | no TS | -0.123000 |
-1.790000 |
| hsa-miR-590-5p |
gtgcaaatgTAAGCTagtg |
0 | GAGCUUAU | m6b | Created | no TS | -0.108000 |
-5.110000 |
| hsa-miR-33a-5p |
gtgcaAATGCAagctagtg |
0 | GUGCAUUG | m6b | Disrupted | -0.056 | no TS |
2.14 |
| hsa-miR-33b-5p |
gtgcaAATGCAagctagtg |
0 | GUGCAUUG | m6b | Disrupted | -0.056 | no TS |
2.04 |
| hsa-miR-4327 |
gtgcaaaTGCAAGCtagtg |
7 |
GGCUUGCA | m7b | Disrupted | -0.271 | no TS |
1.37 |
| hsa-miR-4453 |
gtgcaaatgCAAGCTagtg |
0 | GAGCUUGG | m6b | Disrupted | -0.135 | no TS |
2.14 |
| hsa-miR-4538 |
gtgcaaatgCAAGCTagtg |
0 | GAGCUUGG | m6b | Disrupted | -0.135 | no TS |
0.19 |
| hsa-miR-5579-3p |
gtgcaaatgTAAGCTAgtg |
0 | UUAGCUUA | m7b | (m6c->m7b) | no TS | -0.123 |
-1.79 |
| hsa-miR-590-5p |
gtgcaaatgTAAGCTagtg |
0 | GAGCUUAU | m6b | Created | no TS | -0.108 |
-5.11 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr11:g.34471573G>T | COSN1132059 | HCC42T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3146 |
tctaTAGCATattgtgtaa |
0 | CAUGCUAG | m6b | Created | no TS | -0.161000 |
-8.300000 |
| hsa-miR-338-5p |
tctatagcATATTGTgtaa |
0 | AACAAUAU | m7b | Created | no TS | -0.055000 |
-2.590000 |
| hsa-miR-4686 |
tctatAGCAGATtgtgtaa |
2 |
UAUCUGCU | m7b | Disrupted | -0.232000 | no TS |
0.080000 |
| hsa-miR-3146 |
tctaTAGCATattgtgtaa |
0 | CAUGCUAG | m6b | Created | no TS | -0.161 |
-8.3 |
| hsa-miR-338-5p |
tctatagcATATTGTgtaa |
0 | AACAAUAU | m7b | Created | no TS | -0.055 |
-2.59 |
| hsa-miR-4686 |
tctatAGCAGATtgtgtaa |
2 |
UAUCUGCU | m7b | Disrupted | -0.232 | no TS |
0.08 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr11:g.34471858C>T | COSN5795210 | EOPC-010_tumor | [prostate][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-202-5p |
taaggttctCATAGGAAaa |
2 |
UUCCUAUG | m8a | (m8a->m7b) | -0.381000 | -0.127000 |
1.230000 |
| hsa-miR-337-3p |
taaggttctTATAGGAaaa |
4 |
CUCCUAUA | m7b | (m6c->m7b) | -0.135000 | -0.358000 |
-1.970000 |
| hsa-miR-4511 |
taagGTTCTTataggaaaa |
0 | GAAGAACU | m6b | Created | no TS | -0.091000 |
-0.020000 |
| hsa-miR-4712-3p |
taaggtTCTCATaggaaaa |
2 |
AAUGAGAG | m6b | Disrupted | -0.088000 | no TS |
0.630000 |
| hsa-miR-548b-3p |
taaGGTTCTTataggaaaa |
0 | CAAGAACC | m7b | (m6b->m7b) | no TS | -0.351000 |
-3.040000 |
| hsa-miR-589-5p |
taaGGTTCTCAtaggaaaa |
0 | UGAGAACC | m8a | Disrupted | -0.404000 | no TS |
0.850000 |