| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_000065 |
|---|---|
| Gene Symbol: | C6 |
| Description: | Homo sapiens complement component 6 (C6), transcript variant 1, mRNA. |
| Gene Location: | chr5(-):41142335-41213667 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr5:g.41142253A>G | COSN8225229 | ASHPC_0013_Pa_P | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-5696 |
aaatgAAATGAacaggtaa |
2 |
CUCAUUUA | m6b | Created | -0.043000 | -0.049000 |
-0.860000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr5:g.41142334C>T | COSN2106134 | RK023_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-148a-5p |
ctgAGAACTTggcagataa |
0 | AAAGUUCU | m7b | (m6c->m7b) | no TS | -0.083000 |
-0.020000 |
| hsa-miR-192-3p |
ctgagaacTTGGCAGataa |
0 | CUGCCAAU | m7a | Created | NA | NA |
-2.140000 |
| hsa-miR-4480 |
ctgagaACTTGGCagataa |
0 | AGCCAAGU | m7b | Created | no TS | -0.432000 |
-4.240000 |
| hsa-miR-4727-5p |
ctgagaactTGGCAGATaa |
0 | AUCUGCCA | m8a | (m7a->m8a) | no TS | -0.274000 |
-1.680000 |
| hsa-miR-148a-5p |
ctgAGAACTTggcagataa |
0 | AAAGUUCU | m7b | (m6c->m7b) | no TS | -0.083 |
-0.02 |
| hsa-miR-192-3p |
ctgagaacTTGGCAGataa |
0 | CUGCCAAU | m7a | Created | NA | NA |
-2.14 |
| hsa-miR-4480 |
ctgagaACTTGGCagataa |
0 | AGCCAAGU | m7b | Created | no TS | -0.432 |
-4.24 |
| hsa-miR-4727-5p |
ctgagaactTGGCAGATaa |
0 | AUCUGCCA | m8a | (m7a->m8a) | no TS | -0.274 |
-1.68 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr5:g.41142368A>G | COSN6297255 | RK111_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4793-5p |
tgtgtataCAGGATGTcaa |
1 |
ACAUCCUG | m8a | Disrupted | -0.264000 | no TS |
0.300000 |