SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_001134734
Gene Symbol:	C1orf94
Description:	Homo sapiens chromosome 1 open reading frame 94 (C1orf94), transcript variant 1, mRNA.
Gene Location:	chr1(+):34642552-34684731
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.34218882C>G			COSN10047616		C0021T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1231	ggtcaCAGACAaaacagca	0	GUGUCUGG	m6b	Disrupted	-0.113000	no TS	0.200000
hsa-miR-19a-5p	ggtcacagaCAAAACagca	1	AGUUUUGC	m6b	Disrupted	0.000000	no TS	0.530000
hsa-miR-19b-1-5p	ggtcacagaCAAAACagca	1	AGUUUUGC	m6b	Disrupted	0.000000	no TS	-0.390000
hsa-miR-19b-2-5p	ggtcacagaCAAAACagca	1	AGUUUUGC	m6b	Disrupted	0.000000	no TS	0.720000
hsa-miR-3191-5p	ggtcaCAGAGAaaacagca	0	CUCUCUGG	m6b	Created	no TS	-0.085000	-2.780000
hsa-miR-4288	ggtcaCAGACAAaacagca	0	UUGUCUGC	m7a	Disrupted	-0.110000	no TS	3.280000
hsa-miR-4768-5p	ggtcacAGAGAAaacagca	0	AUUCUCUC	m6b	Created	no TS	-0.042000	-6.260000
hsa-miR-632	ggtcaCAGACAaaacagca	0	GUGUCUGC	m6b	Disrupted	-0.117000	no TS	7.980000

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.34218959A>G			COSN8638222		699_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-147a	acaagctaCACACACacac	0	GUGUGUGG	m7a	Disrupted	NA	NA	0.480000
hsa-miR-147b	acaagctaCGCACACacac	0	GUGUGCGG	m7a	Created	NA	NA	-5.220000
hsa-miR-210	acaagctACGCACAcacac	0	CUGUGCGU	m7b	Created	no TS	-0.250000	-1.310000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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